C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037999 Arap2 10090 - 5:62602445-62766198 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000076623 Arap2-001 62602445-62766198 protein_coding
  ENSMUST00000159022 Arap2-006 62635958-62649853 protein_coding
  ENSMUST00000159470 Arap2-003 62749296-62765656 protein_coding
  ENSMUST00000160419 Arap2-005 62642207-62646241 retained_intron
  ENSMUST00000160620 Arap2-002 62602450-62612374 retained_intron
  ENSMUST00000161911 Arap2-004 62706617-62730821 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076623ENSMUST00000159022ENSMUST00000159470ENSMUST00000160620
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076623 1.263±0.05 0.282±0.10 0.751±0.25 4.576±5.96 1.606±0.76 2.501±0.95 0.769±0.04 2.232±0.17 0.487±0.19 4.160±1.11 0.140±0.07 0.743±0.49 3.933±2.82 1.310±1.13
ENSMUST00000159022 N/A 0.892±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.899±0.00 N/A N/A
ENSMUST00000160620 0.652±0.00 0.178±0.10 N/A N/A 1.207±0.00 N/A 0.634±0.07 1.177±0.00 0.535±0.07 N/A 0.114±0.06 0.820±0.51 2.158±0.46 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FD CIL_0002FD_0002 CGP 5:62602445-62888308

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005547 IEA phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction
GO:0008060 IEA ARF GTPase activator activity
GO:0008270 IEA zinc ion binding
GO:0032312 IEA regulation of ARF GTPase activity
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056389 ARAP2 (1 of 2) ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein_coding Danio_rerio
ENSG00000047365 ARAP2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 protein_coding Homo_sapiens

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