C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000076623 Arap2-001 ENSMUSG00000037999 10090 - 5:62602445-62766198 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076623
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076623 1.263±0.05 0.282±0.10 0.751±0.25 4.576±5.96 1.606±0.76 2.501±0.95 0.769±0.04 2.232±0.17 0.487±0.19 4.160±1.11 0.140±0.07 0.743±0.49 3.933±2.82 1.310±1.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FD CIL_0002FD_0002 CGP 5:62602445-62888308

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005547 IEA phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction
GO:0008060 IEA ARF GTPase activator activity
GO:0008270 IEA zinc ion binding
GO:0032312 IEA regulation of ARF GTPase activity
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000042624 arap3-201 protein_coding Danio_rerio 0.00000006 66
ENST00000303965 ARAP2-001 protein_coding Homo_sapiens 0 4968
ENST00000506189 ARAP2-004 protein_coding Homo_sapiens 0 209
ENST00000508066 ARAP2-002 retained_intron Homo_sapiens 0 1960
ENST00000512804 ARAP2-003 retained_intron Homo_sapiens 0 542
ENST00000618163 ARAP2-201 protein_coding Homo_sapiens 0 2985

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