C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cell adhesion molecule-related/down-regulated by oncogenes
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038119 Cdon 10090 + 9:35421128-35507652 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042842 Cdon-201 35452076-35507651 protein_coding
  ENSMUST00000119129 Cdon-001 35421597-35507652 protein_coding
  ENSMUST00000127264 Cdon-005 35457478-35470085 protein_coding
  ENSMUST00000137200 Cdon-003 35421554-35455340 nonsense_mediated_decay
  ENSMUST00000151682 Cdon-004 35421128-35455365 protein_coding
  ENSMUST00000154652 Cdon-002 35423588-35471155 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042842ENSMUST00000119129ENSMUST00000154652
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042842 3.079±0.24 0.553±0.21 4.142±0.18 4.454±2.04 1.575±0.00 1.099±0.19 1.715±0.00 1.204±0.00 0.179±0.11 1.304±0.01 1.016±0.61 6.683±4.24 1.126±0.60 0.292±0.28
ENSMUST00000119129 6.640±3.04 1.709±0.28 2.340±1.28 4.121±1.26 7.152±1.70 3.626±0.79 1.456±0.37 0.719±0.42 0.151±0.08 2.812±0.30 0.988±0.34 9.357±1.41 1.482±0.66 0.339±0.18
ENSMUST00000154652 N/A N/A N/A N/A N/A N/A N/A N/A 0.133±0.00 N/A N/A N/A N/A 0.412±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W7 CIL_0007W7_0002 VISTA 9:35123876-35727017

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001708 IGI cell fate specification
GO:0001934 IDA positive regulation of protein phosphorylation
GO:0002088 IMP lens development in camera-type eye
GO:0005515 IPI protein binding
GO:0005887 ISO integral component of plasma membrane
GO:0007224 IGI smoothened signaling pathway
GO:0007520 IMP myoblast fusion
GO:0009952 IMP anterior/posterior pattern specification
GO:0009986 TAS cell surface
GO:0010172 IMP embryonic body morphogenesis
GO:0014816 IMP skeletal muscle satellite cell differentiation
GO:0016202 ISO regulation of striated muscle tissue development
GO:0016337 TAS single organismal cell-cell adhesion
GO:0021987 IMP cerebral cortex development
GO:0043410 IMP positive regulation of MAPK cascade
GO:0043497 IDA regulation of protein heterodimerization activity
GO:0045663 TAS positive regulation of myoblast differentiation
GO:0045664 IMP regulation of neuron differentiation
GO:0045666 IDA positive regulation of neuron differentiation
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter
GO:0048598 IGI embryonic morphogenesis
GO:0048643 IMP positive regulation of skeletal muscle tissue development
GO:0051057 IMP positive regulation of small GTPase mediated signal transduction
GO:0051146 IGI striated muscle cell differentiation
GO:0060059 IMP embryonic retina morphogenesis in camera-type eye
GO:2000179 IMP positive regulation of neural precursor cell proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061328 cdon cell adhesion molecule-related/down-regulated by oncogenes protein_coding Danio_rerio
ENSG00000064309 CDON cell adhesion associated, oncogene regulated protein_coding Homo_sapiens

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