C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: crystallin, gamma N
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038135 Crygn 10090 - 5:24751003-24758008 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047119 Crygn-001 24751003-24758008 protein_coding
  ENSMUST00000123386 Crygn-002 24751003-24751324 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047119ENSMUST00000123386
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047119 0.188±0.01 N/A 0.173±0.00 0.393±0.15 N/A N/A 0.119±0.05 0.416±0.40 0.255±0.00 N/A 0.086±0.00 0.858±0.36 0.049±0.00
ENSMUST00000123386 1.028±0.00 1.696±0.00 N/A 4.055±0.00 3.916±2.95 0.951±0.00 1.026±0.00 N/A 2.013±0.00 0.717±0.25 1.109±0.21 4.614±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RX CIL_0007RX_0002 VISTA 5:24430554-25031843
CIL_0007T7 CIL_0007T7_0002 VISTA 5:24699254-25303507
CIL_0007T1 CIL_0007T1_0002 VISTA 5:24708595-25311977
CIL_0000HN CIL_0000HN_0002 CGP 5:24711738-24758008
CIL_000457 CIL_000457_0002 CGP 5:24751003-24842624

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005212 IEA structural constituent of eye lens
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030411 crygn2 crystallin, gamma N2 protein_coding Danio_rerio
ENSDARG00000087437 crygn1 crystallin, gamma N1 protein_coding Danio_rerio
ENSG00000127377 CRYGN crystallin, gamma N protein_coding Homo_sapiens

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