C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000HN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000187260-ENSG00000127377 CGP 9606 7:151375909-151440813
GeneTranscriptPositionBiotype
ENSG00000013374 (NUB1)
negative regulator of ubiquitin-like proteins 1 		ENST00000413040 (NUB1-001) 151341699-151378449 protein_coding
ENST00000460712 (NUB1-014) 151368733-151377281 protein_coding
ENST00000468404 (NUB1-003) 151341804-151361249 nonsense_mediated_decay
ENST00000470229 (NUB1-007) 151341812-151355815 protein_coding
ENST00000470316 (NUB1-005) 151345345-151361237 nonsense_mediated_decay
ENST00000477666 (NUB1-011) 151352252-151360244 processed_transcript
ENST00000480714 (NUB1-013) 151368830-151374624 protein_coding
ENST00000480907 (NUB1-010) 151351328-151368805 retained_intron
ENST00000483358 (NUB1-008) 151345345-151360209 protein_coding
ENST00000493588 (NUB1-009) 151351120-151360295 retained_intron
ENST00000497987 (NUB1-012) 151360141-151369193 retained_intron
ENST00000568733 (NUB1-002) 151341711-151378449 protein_coding
ENSG00000127377 (CRYGN)
crystallin, gamma N 		ENST00000337323 (CRYGN-001) 151429970-151440044 protein_coding
ENST00000462809 (CRYGN-005) 151429719-151436916 processed_transcript
ENST00000476631 (CRYGN-002) 151428835-151440813 processed_transcript
ENST00000478106 (CRYGN-004) 151432179-151436273 processed_transcript
ENST00000491928 (CRYGN-003) 151430001-151440008 protein_coding
ENSG00000241456 (RP4-555L14.4)
 ENST00000465549 (RP4-555L14.4-001) 151427683-151439124 antisense
CIL_0000HN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000055235-ENSMUSG00000038135 CGP 10090 5:24711738-24758008
GeneTranscriptPositionBiotype
ENSMUSG00000038135 (Crygn)
crystallin, gamma N 		ENSMUST00000047119 (Crygn-001) 24751003-24758008 protein_coding
ENSMUST00000123386 (Crygn-002) 24751003-24751324 processed_transcript
ENSMUSG00000055235 (Wdr86)
WD repeat domain 86 		ENSMUST00000068693 (Wdr86-001) 24711738-24730727 protein_coding
ENSMUST00000127320 (Wdr86-003) 24712638-24715581 protein_coding
ENSMUST00000142607 (Wdr86-002) 24712265-24730680 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000HN_0001ENSG00000013374ENST00000413040ENST00000460712ENST00000468404ENST00000470229ENST00000470316ENST00000477666ENST00000480714ENST00000480907ENST00000483358ENST00000493588ENST00000497987ENST00000568733ENSG00000127377ENST00000337323ENST00000462809ENST00000476631ENST00000478106ENST00000491928ENSG00000241456ENST00000465549CIL_0000HN_0002ENSMUSG00000038135ENSMUST00000047119ENSMUST00000123386ENSMUSG00000055235ENSMUST00000068693ENSMUST00000127320ENSMUST00000142607
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000HN_0001ENSG00000013374ENST00000413040ENST00000468404ENST00000477666ENST00000480907ENST00000483358ENST00000568733ENSG00000127377ENST00000337323ENST00000462809ENST00000476631ENST00000478106ENST00000491928ENSG00000241456ENST00000465549CIL_0000HN_0002ENSMUSG00000038135ENSMUST00000047119ENSMUST00000123386ENSMUSG00000055235ENSMUST00000068693ENSMUST00000127320ENSMUST00000142607
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000013374 ENST00000413040 9.129±0.00 5.818±0.00 1.371±0.00 5.303±2.67 5.893±3.12 8.904±7.54 5.061±3.82 8.014±4.72 2.448±1.01 17.392±0.00 8.403±7.11 12.731±0.75 11.029±2.49 13.762±1.89
ENST00000460712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468404 7.213±0.00 6.807±0.00 N/A 3.943±0.00 4.484±1.49 1.435±0.00 2.717±1.78 4.324±0.00 1.804±0.63 7.429±4.70 2.019±1.34 4.667±1.11 7.775±1.96 5.264±0.00
ENST00000470229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 32.607±0.00 22.025±0.00 35.650±0.00
ENST00000480714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480907 N/A N/A 2.211±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 35.962±0.00
ENST00000483358 N/A N/A 2.500±0.00 6.060±1.09 N/A N/A N/A N/A 2.621±0.00 N/A N/A 29.464±0.00 21.368±0.00 41.277±29.96
ENST00000493588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568733 5.325±0.00 N/A N/A N/A 2.411±0.00 N/A N/A N/A 1.895±0.00 N/A N/A 2.841±1.07 2.979±0.00 N/A
ENSG00000127377 ENST00000337323 N/A 0.068±0.00 N/A N/A 0.046±0.00 0.376±0.00 N/A N/A N/A 0.161±0.00 0.031±0.00 0.535±0.19 0.622±0.38 0.179±0.05
ENST00000462809 N/A N/A N/A 0.043±0.00 N/A N/A N/A 0.144±0.00 N/A N/A N/A N/A N/A 0.215±0.00
ENST00000476631 0.051±0.00 0.051±0.00 N/A N/A 0.034±0.00 0.091±0.00 N/A 0.012±0.00 N/A N/A N/A 0.078±0.03 0.429±0.27 0.022±0.00
ENST00000478106 N/A N/A N/A N/A 0.156±0.00 0.561±0.00 N/A N/A N/A N/A N/A 0.861±0.00 1.287±0.58 N/A
ENST00000491928 0.162±0.00 N/A N/A 0.130±0.00 N/A N/A 0.038±0.00 N/A N/A N/A N/A 0.178±0.00 N/A N/A
ENSG00000241456 ENST00000465549 N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A 0.197±0.03 0.100±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038135 ENSMUST00000047119 0.188±0.01 N/A N/A 0.173±0.00 0.393±0.15 N/A N/A 0.119±0.05 0.416±0.40 0.255±0.00 N/A 0.086±0.00 0.858±0.36 0.049±0.00
ENSMUST00000123386 1.028±0.00 1.696±0.00 N/A N/A 4.055±0.00 3.916±2.95 0.951±0.00 1.026±0.00 N/A 2.013±0.00 0.717±0.25 1.109±0.21 4.614±0.00 N/A
ENSMUSG00000055235 ENSMUST00000068693 1.735±0.59 2.742±0.53 0.176±0.01 1.710±1.09 5.326±1.01 0.281±0.12 0.289±0.14 2.587±0.18 0.604±0.36 0.891±0.06 0.109±0.07 5.382±1.55 1.403±1.06 0.186±0.07
ENSMUST00000127320 N/A N/A N/A N/A N/A 0.802±0.00 N/A N/A N/A N/A 0.288±0.00 N/A N/A N/A
ENSMUST00000142607 0.659±0.14 0.415±0.15 0.057±0.02 0.497±0.31 1.296±0.06 0.117±0.06 0.068±0.03 0.443±0.10 0.190±0.11 0.213±0.08 0.023±0.01 0.944±0.22 0.501±0.30 0.037±0.03

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