C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: charged multivesicular body protein 4B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038467 Chmp4b 10090 + 2:154651705-154694785 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000044277 Chmp4b-001 154657018-154694785 protein_coding
  ENSMUST00000136788 Chmp4b-003 154691070-154694281 retained_intron
  ENSMUST00000151668 Chmp4b-002 154651705-154694780 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044277ENSMUST00000136788ENSMUST00000151668
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044277 53.149±5.47 58.808±2.61 106.804±18.87 105.994±60.81 37.369±4.67 74.009±8.52 33.809±1.06 45.406±5.78 42.076±20.33 55.303±2.46 64.453±2.61 68.098±29.14 169.463±70.10 53.044±10.13
ENSMUST00000136788 N/A N/A N/A 18.564±0.00 N/A N/A N/A N/A 40.608±0.00 N/A N/A 37.058±5.51 40.574±6.35 N/A
ENSMUST00000151668 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.746±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001NU CIL_0001NU_0002 CGP 2:154613297-154694785

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000815 IEA ESCRT III complex
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006620 IEA posttranslational protein targeting to membrane
GO:0009898 IEA cytoplasmic side of plasma membrane
GO:0030496 IEA midbody
GO:0042802 IEA identical protein binding
GO:0042803 IEA protein homodimerization activity
GO:0050792 IEA regulation of viral process
GO:0051260 IEA protein homooligomerization
GO:0070062 IEA extracellular vesicular exosome
GO:1901215 IEA negative regulation of neuron death
GO:1902188 IEA positive regulation of viral release from host cell
GO:1902902 IEA negative regulation of autophagic vacuole assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007323 chmp4b chromatin modifying protein 4B protein_coding Danio_rerio
ENSDARG00000016255 CHMP4B (2 of 2) charged multivesicular body protein 4B protein_coding Danio_rerio
ENSG00000101421 CHMP4B charged multivesicular body protein 4B protein_coding Homo_sapiens

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