C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001NU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000131061-ENSG00000101421 CGP 9606 20:33731657-33854366
GeneTranscriptPositionBiotype
ENSG00000101421 (CHMP4B)
charged multivesicular body protein 4B
ENST00000217402 (CHMP4B-001) 33811304-33854366 protein_coding
ENSG00000131061 (ZNF341)
zinc finger protein 341
ENST00000342427 (ZNF341-001) 33731657-33792269 protein_coding
ENST00000375200 (ZNF341-201) 33731760-33792269 protein_coding
ENST00000483118 (ZNF341-003) 33732010-33792269 nonsense_mediated_decay
ENST00000493497 (ZNF341-004) 33787088-33792269 retained_intron
ENST00000497876 (ZNF341-002) 33732002-33792269 nonsense_mediated_decay
ENSG00000230753 (ZNF341-AS1)
ZNF341 antisense RNA 1
ENST00000423074 (ZNF341-AS1-002) 33787373-33793027 antisense
ENST00000439444 (ZNF341-AS1-001) 33787447-33811074 antisense
ENST00000443171 (ZNF341-AS1-003) 33787375-33811097 antisense
ENSG00000230837 (RPL31P2)
ribosomal protein L31 pseudogene 2
ENST00000413849 (RPL31P2-001) 33752167-33752543 processed_pseudogene
CIL_0001NU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000059842-ENSMUSG00000038467 CGP 10090 2:154613297-154694785
GeneTranscriptPositionBiotype
ENSMUSG00000038467 (Chmp4b)
charged multivesicular body protein 4B
ENSMUST00000044277 (Chmp4b-001) 154657018-154694785 protein_coding
ENSMUST00000136788 (Chmp4b-003) 154691070-154694281 retained_intron
ENSMUST00000151668 (Chmp4b-002) 154651705-154694780 processed_transcript
ENSMUSG00000059842 (Zfp341)
zinc finger protein 341
ENSMUST00000081926 (Zfp341-001) 154613297-154646821 protein_coding
ENSMUST00000109702 (Zfp341-003) 154613370-154646778 protein_coding
ENSMUST00000126421 (Zfp341-002) 154613356-154646778 nonsense_mediated_decay
ENSMUSG00000085483 (Gm14198)
predicted gene 14198
ENSMUST00000153208 (Gm14198-001) 154630002-154632636 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001NU_0001ENSG00000101421ENST00000217402ENSG00000131061ENST00000342427ENST00000375200ENST00000483118ENST00000493497ENST00000497876ENSG00000230753ENST00000423074ENST00000439444ENST00000443171ENSG00000230837ENST00000413849CIL_0001NU_0002ENSMUSG00000038467ENSMUST00000044277ENSMUST00000136788ENSMUST00000151668ENSMUSG00000059842ENSMUST00000081926ENSMUST00000109702ENSMUST00000126421ENSMUSG00000085483ENSMUST00000153208
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001NU_0001ENSG00000101421ENST00000217402ENSG00000131061ENST00000342427ENST00000375200ENST00000483118ENST00000493497ENST00000497876ENSG00000230753ENST00000423074ENST00000439444ENST00000443171ENSG00000230837ENST00000413849CIL_0001NU_0002ENSMUSG00000038467ENSMUST00000044277ENSMUST00000136788ENSMUST00000151668ENSMUSG00000059842ENSMUST00000081926ENSMUST00000109702ENSMUST00000126421ENSMUSG00000085483ENSMUST00000153208
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101421 ENST00000217402 69.142±0.00 60.068±0.00 1.980±0.00 44.157±37.32 28.524±19.68 56.432±47.61 21.856±20.81 27.987±24.93 13.698±7.50 50.546±49.05 31.737±26.73 161.650±171.30 73.675±16.72 80.339±16.67
ENSG00000131061 ENST00000342427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.215±0.00 1.014±0.30 0.606±0.23
ENST00000375200 N/A 0.245±0.00 N/A 0.152±0.00 N/A N/A N/A N/A N/A N/A 1.120±0.00 0.573±0.27 0.448±0.01 1.608±0.00
ENST00000483118 0.480±0.00 0.517±0.00 N/A 0.670±0.07 0.796±0.00 0.761±0.00 0.448±0.00 1.135±0.00 N/A 0.625±0.29 0.303±0.00 0.564±0.28 0.360±0.18 N/A
ENST00000493497 0.210±0.00 0.497±0.00 N/A 0.110±0.00 0.276±0.00 0.321±0.00 0.088±0.02 0.219±0.20 0.117±0.00 0.215±0.06 N/A 0.460±0.19 0.174±0.00 0.367±0.00
ENST00000497876 0.172±0.00 0.663±0.00 0.176±0.00 0.143±0.00 0.449±0.00 0.442±0.24 0.175±0.17 N/A 0.235±0.00 N/A 0.911±0.00 0.832±0.00 0.477±0.28 N/A
ENSG00000230753 ENST00000423074 1.005±0.00 N/A N/A N/A N/A 0.878±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.358±0.00
ENST00000443171 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.393±0.00
ENSG00000230837 ENST00000413849 0.075±0.00 0.321±0.00 N/A 0.041±0.00 0.268±0.03 N/A 0.072±0.00 N/A 0.072±0.00 N/A N/A N/A N/A 0.058±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038467 ENSMUST00000044277 53.149±5.47 58.808±2.61 106.804±18.87 105.994±60.81 37.369±4.67 74.009±8.52 33.809±1.06 45.406±5.78 42.076±20.33 55.303±2.46 64.453±2.61 68.098±29.14 169.463±70.10 53.044±10.13
ENSMUST00000136788 N/A N/A N/A 18.564±0.00 N/A N/A N/A N/A 40.608±0.00 N/A N/A 37.058±5.51 40.574±6.35 N/A
ENSMUST00000151668 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.746±0.00
ENSMUSG00000059842 ENSMUST00000081926 1.282±0.41 0.930±0.40 1.468±0.11 6.044±0.71 0.915±0.53 1.417±0.27 1.104±0.16 1.613±0.28 1.543±1.30 1.307±0.53 0.690±0.25 1.092±0.66 1.370±0.27 N/A
ENSMUST00000109702 0.435±0.11 1.726±0.38 N/A N/A 1.289±0.43 0.939±0.30 0.232±0.06 0.451±0.18 0.619±0.26 1.238±0.53 0.784±0.00 2.522±0.58 0.450±0.00 N/A
ENSMUST00000126421 N/A N/A N/A 0.858±0.00 N/A N/A N/A N/A 0.580±0.40 N/A 0.153±0.00 0.770±0.00 0.712±0.37 N/A
ENSMUSG00000085483 ENSMUST00000153208 N/A N/A N/A 2.182±0.00 N/A N/A N/A N/A 14.059±6.09 N/A N/A 1.583±0.00 0.775±0.07 N/A

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