C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calpain 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038599 Capn8 10090 + 1:182565007-182632352 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000048941 Capn8-201 182565007-182632352 protein_coding
  ENSMUST00000168514 Capn8-202 182565007-182606526 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048941ENSMUST00000168514
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048941 0.035±0.02 N/A 0.024±0.00 0.024±0.00 1.165±0.16 2.024±0.48 N/A N/A 0.009±0.01 0.079±0.02 0.021±0.00 0.127±0.07 0.098±0.06 0.223±0.05
ENSMUST00000168514 0.016±0.00 0.035±0.00 0.014±0.00 0.037±0.00 0.350±0.00 2.129±0.06 0.013±0.00 0.017±0.01 0.024±0.01 0.140±0.04 0.041±0.00 0.115±0.05 0.175±0.21 0.138±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MP CIL_0005MP_0002 CGP 1:182467256-182632352

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004198 IBA calcium-dependent cysteine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005737 IBA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0006508 IBA proteolysis
GO:0007586 IEA digestion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055715 capn8 calpain 8 protein_coding Danio_rerio
ENSG00000203697 CAPN8 calpain 8 protein_coding Homo_sapiens

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