C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, H+ transporting, lysosomal V0 subunit A4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038600 Atp6v0a4 10090 - 6:38048483-38124586 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040259 Atp6v0a4-001 38048483-38124586 protein_coding
  ENSMUST00000114908 Atp6v0a4-002 38048483-38109549 protein_coding
  ENSMUST00000130816 Atp6v0a4-003 38093680-38124489 processed_transcript
  ENSMUST00000132736 Atp6v0a4-007 38048483-38051561 processed_transcript
  ENSMUST00000135594 Atp6v0a4-006 38051281-38055153 retained_intron
  ENSMUST00000138385 Atp6v0a4-004 38088719-38097185 retained_intron
  ENSMUST00000144752 Atp6v0a4-005 38078915-38083372 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeKidneyLungMuscleOvaryPlacentaENSMUST00000040259ENSMUST00000114908ENSMUST00000138385
Transcript ID Adipose Kidney Lung Muscle Ovary Placenta
ENSMUST00000040259 N/A 79.767±5.65 N/A 0.091±0.06 1.455±0.02 4.939±0.48
ENSMUST00000114908 0.434±0.00 17.281±0.00 3.261±0.54 0.118±0.06 N/A N/A
ENSMUST00000138385 N/A N/A N/A 0.293±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002QA CIL_0002QA_0002 CGP 6:37983739-38124586
CIL_0002Q9 CIL_0002Q9_0002 CGP 6:38048483-38124586

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000220 IEA vacuolar proton-transporting V-type ATPase, V0 domain
GO:0001503 IEA ossification
GO:0005515 IEA protein binding
GO:0005765 IEA lysosomal membrane
GO:0005768 IDA endosome
GO:0005886 IEA plasma membrane
GO:0005903 IDA brush border
GO:0006885 IEA regulation of pH
GO:0007588 IEA excretion
GO:0007605 IEA sensory perception of sound
GO:0008553 ISA hydrogen-exporting ATPase activity, phosphorylative mechanism
GO:0015991 IPI ATP hydrolysis coupled proton transport
GO:0015992 IEA proton transport
GO:0016021 IEA integral component of membrane
GO:0016324 IDA apical plasma membrane
GO:0016471 IPI vacuolar proton-transporting V-type ATPase complex
GO:0031526 IEA brush border membrane
GO:0045177 IDA apical part of cell
GO:0051117 IEA ATPase binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000105929 ATP6V0A4 ATPase, H+ transporting, lysosomal V0 subunit a4 protein_coding Homo_sapiens

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