C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sterile alpha motif domain containing 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038605 Samd10 10090 - 2:181595218-181599212 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000060173 Samd10-001 181595218-181599212 protein_coding
  ENSMUST00000136249 Samd10-003 181596792-181597606 retained_intron
  ENSMUST00000183836 Samd10-002 181595221-181599198 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000060173ENSMUST00000136249ENSMUST00000183836
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000060173 2.169±1.13 8.706±2.69 3.500±1.05 10.130±7.42 4.623±1.57 6.874±1.78 0.927±0.27 5.534±1.09 0.820±0.29 5.345±1.32 1.705±0.92 6.534±3.24 2.765±0.95 11.626±6.04
ENSMUST00000136249 N/A N/A N/A 0.560±0.00 N/A N/A N/A N/A N/A N/A N/A 0.963±0.00 0.319±0.00 N/A
ENSMUST00000183836 1.403±0.59 9.863±1.79 3.916±0.56 21.106±14.00 2.519±1.10 6.611±2.06 0.786±0.13 4.473±1.22 0.755±0.24 4.674±0.61 1.751±0.82 5.692±1.90 2.750±2.67 7.896±3.26

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079978 samd10a sterile alpha motif domain containing 10a protein_coding Danio_rerio
ENSDARG00000094377 samd10b sterile alpha motif domain containing 10b protein_coding Danio_rerio
ENSG00000130590 SAMD10 sterile alpha motif domain containing 10 protein_coding Homo_sapiens

Loading