C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sterile alpha motif domain containing 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130590 SAMD10 9606 - 20:63974113-63980008 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000369886 SAMD10-001 63974113-63979642 protein_coding
  ENST00000450107 SAMD10-004 63977297-63979642 protein_coding
  ENST00000478694 SAMD10-003 63975475-63979984 processed_transcript
  ENST00000498830 SAMD10-002 63975360-63980008 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000369886ENST00000478694ENST00000498830
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000369886 0.354±0.00 0.130±0.00 N/A 0.364±0.00 0.555±0.43 0.504±0.40 1.275±0.96 0.409±0.37 0.653±0.00 0.114±0.07 5.218±6.67 2.585±1.22 1.723±0.00
ENST00000478694 N/A 0.235±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498830 N/A N/A 0.810±0.00 0.478±0.00 N/A N/A N/A 0.435±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004F5 CIL_0004F5_0001 CGP 20:63939829-64048758

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079978 samd10a sterile alpha motif domain containing 10a protein_coding Danio_rerio
ENSDARG00000094377 samd10b sterile alpha motif domain containing 10b protein_coding Danio_rerio
ENSMUSG00000038605 Samd10 sterile alpha motif domain containing 10 protein_coding Mus_musculus

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