C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: consortin, connexin sorting protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038949 Cnst 10090 + 1:179546370-179627478 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040706 Cnst-001 179546370-179627478 protein_coding
  ENSMUST00000143270 Cnst-004 179593390-179605374 processed_transcript
  ENSMUST00000144370 Cnst-002 179546499-179582936 retained_intron
  ENSMUST00000153962 Cnst-003 179546509-179602330 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040706
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040706 14.284±1.88 13.029±0.84 9.711±0.01 10.278±1.56 11.054±4.24 14.930±1.17 9.477±0.55 5.978±0.95 4.934±3.19 11.555±1.16 11.131±1.12 11.761±2.92 5.764±1.26 2.571±1.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007AN CIL_0007AN_0003 CGP 1:179528055-179627478
CIL_0007AM CIL_0007AM_0003 CGP 1:179546370-179687189

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005802 ISS trans-Golgi network
GO:0005886 ISS plasma membrane
GO:0010923 ISS negative regulation of phosphatase activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0019902 ISS phosphatase binding
GO:0030133 ISS transport vesicle
GO:0042998 ISS positive regulation of Golgi to plasma membrane protein transport
GO:0043234 IEA protein complex
GO:0071253 IDA connexin binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042759 cnstb consortin, connexin sorting protein b protein_coding Danio_rerio
ENSDARG00000086283 cnsta consortin, connexin sorting protein a protein_coding Danio_rerio
ENSG00000162852 CNST consortin, connexin sorting protein protein_coding Homo_sapiens

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