C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007AM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000086283-ENSDARG00000075053 CGP 7955 17:11939217-12019426
GeneTranscriptPositionBiotype
ENSDARG00000075053 (SCCPDH (2 of 3))
saccharopine dehydrogenase (putative)
ENSDART00000112888 (SCCPDH (2 of 3)-001) 12002127-12019426 protein_coding
ENSDART00000113558 (SCCPDH (2 of 3)-201) 12002127-12019425 protein_coding
ENSDARG00000086283 (cnsta)
consortin, connexin sorting protein a
ENSDART00000126501 (cnsta-201) 11952184-12001155 protein_coding
ENSDART00000155329 (cnsta-001) 11939217-11998882 protein_coding
CIL_0007AM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000162852-ENSG00000143653 CGP 9606 1:246566444-246768137
GeneTranscriptPositionBiotype
ENSG00000143653 (SCCPDH)
saccharopine dehydrogenase (putative)
ENST00000366510 (SCCPDH-001) 246724047-246768137 protein_coding
ENSG00000225300 (RP11-1086F11.1)
ENST00000417786 (RP11-1086F11.1-001) 246605873-246608102 sense_intronic
ENSG00000228879 (RP11-439E19.6)
ENST00000413092 (RP11-439E19.6-001) 246755511-246755832 processed_pseudogene
ENSG00000228955 (RP11-452J6.2)
ENST00000449978 (RP11-452J6.2-001) 246632251-246632478 processed_pseudogene
ENSG00000235021 (RP11-439E19.7)
ENST00000442712 (RP11-439E19.7-001) 246690047-246691821 lincRNA
ENSG00000260698 (RP11-439E19.9)
ENST00000570141 (RP11-439E19.9-001) 246682108-246685075 lincRNA
CIL_0007AM_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038949-ENSMUSG00000038936 CGP 10090 1:179546370-179687189
GeneTranscriptPositionBiotype
ENSMUSG00000038936 (Sccpdh)
saccharopine dehydrogenase (putative)
ENSMUST00000040538 (Sccpdh-001) 179668210-179687189 protein_coding
ENSMUST00000131039 (Sccpdh-002) 179668260-179677515 retained_intron
ENSMUST00000134287 (Sccpdh-004) 179668210-179687189 nonsense_mediated_decay
ENSMUST00000143936 (Sccpdh-005) 179680547-179684491 protein_coding
ENSMUST00000144480 (Sccpdh-006) 179680518-179686825 protein_coding
ENSMUSG00000038949 (Cnst)
consortin, connexin sorting protein
ENSMUST00000040706 (Cnst-001) 179546370-179627478 protein_coding
ENSMUST00000143270 (Cnst-004) 179593390-179605374 processed_transcript
ENSMUST00000144370 (Cnst-002) 179546499-179582936 retained_intron
ENSMUST00000153962 (Cnst-003) 179546509-179602330 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007AM_0001ENSDARG00000075053ENSDART00000112888ENSDART00000113558ENSDARG00000086283ENSDART00000126501ENSDART00000155329CIL_0007AM_0002ENSG00000143653ENST00000366510ENSG00000225300ENST00000417786ENSG00000228879ENST00000413092ENSG00000228955ENST00000449978ENSG00000235021ENST00000442712ENSG00000260698ENST00000570141CIL_0007AM_0003ENSMUSG00000038936ENSMUST00000040538ENSMUST00000131039ENSMUST00000134287ENSMUST00000143936ENSMUST00000144480ENSMUSG00000038949ENSMUST00000040706ENSMUST00000143270ENSMUST00000144370ENSMUST00000153962
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007AM_0001ENSDARG00000075053ENSDART00000112888ENSDART00000113558ENSDARG00000086283ENSDART00000126501ENSDART00000155329CIL_0007AM_0002ENSG00000143653ENST00000366510ENSG00000225300ENST00000417786ENSG00000228879ENST00000413092ENSG00000228955ENST00000449978ENSG00000235021ENST00000442712ENSG00000260698ENST00000570141CIL_0007AM_0003ENSMUSG00000038936ENSMUST00000040538ENSMUST00000134287ENSMUSG00000038949ENSMUST00000040706
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000075053 ENSDART00000112888 N/A N/A N/A 0.094±0.09 N/A N/A 0.011±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000113558 N/A N/A N/A 0.112±0.07 N/A N/A 0.618±0.60 10.394±6.71 0.396±0.00 N/A N/A N/A N/A N/A
ENSDARG00000086283 ENSDART00000126501 N/A N/A N/A 1.371±0.03 N/A N/A 1.035±0.38 2.417±0.21 1.332±0.00 N/A N/A N/A N/A N/A
ENSDART00000155329 N/A N/A N/A 2.092±0.00 N/A N/A 0.420±0.24 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000143653 ENST00000366510 11.505±0.00 8.435±0.00 3.945±0.00 20.499±11.81 11.438±8.53 10.041±7.52 6.754±4.10 21.065±1.92 19.360±12.66 11.767±0.00 6.441±2.69 10.979±5.56 15.062±1.96 62.436±20.52
ENSG00000225300 ENST00000417786 0.393±0.00 0.666±0.00 0.204±0.00 0.416±0.00 0.356±0.20 0.061±0.00 0.295±0.03 0.259±0.12 0.680±0.53 0.168±0.05 0.093±0.00 0.182±0.13 0.041±0.01 1.455±0.36
ENSG00000228879 ENST00000413092 N/A 0.047±0.00 N/A N/A N/A 1.514±0.00 0.133±0.00 N/A N/A N/A N/A 0.174±0.07 N/A N/A
ENSG00000228955 ENST00000449978 0.105±0.00 N/A N/A N/A N/A N/A 0.214±0.00 N/A N/A N/A N/A 0.249±0.00 N/A 0.209±0.00
ENSG00000235021 ENST00000442712 N/A 0.074±0.00 N/A 0.275±0.00 0.165±0.00 0.282±0.00 N/A N/A N/A N/A N/A 0.058±0.02 0.192±0.13 0.241±0.09
ENSG00000260698 ENST00000570141 0.211±0.00 0.554±0.00 N/A 0.171±0.11 0.227±0.00 0.245±0.13 0.144±0.00 0.218±0.00 0.105±0.00 0.217±0.00 0.061±0.00 0.108±0.04 0.039±0.02 0.620±0.27
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038936 ENSMUST00000040538 13.729±1.04 N/A 17.309±3.44 18.530±5.95 5.654±2.78 0.994±0.25 22.632±5.60 9.509±1.32 2.918±1.57 7.452±2.05 15.256±0.90 7.578±5.16 11.764±8.95 151.606±59.93
ENSMUST00000131039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134287 2.724±0.00 37.574±15.47 N/A N/A 8.912±4.23 3.837±1.70 N/A 2.521±1.20 0.952±0.32 4.532±0.56 N/A 12.836±5.87 N/A N/A
ENSMUST00000143936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000038949 ENSMUST00000040706 14.284±1.88 13.029±0.84 9.711±0.01 10.278±1.56 11.054±4.24 14.930±1.17 9.477±0.55 5.978±0.95 4.934±3.19 11.555±1.16 11.131±1.12 11.761±2.92 5.764±1.26 2.571±1.68
ENSMUST00000143270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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