C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin-conjugating enzyme E2L 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038965 Ube2l3 10090 - 16:17152013-17202649 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000090192 Ube2l3-201 17152015-17201492 protein_coding
  ENSMUST00000115699 Ube2l3-001 17152013-17202649 protein_coding
  ENSMUST00000115700 Ube2l3-003 17153310-17201494 protein_coding
  ENSMUST00000122873 Ube2l3-002 17157297-17201473 retained_intron
  ENSMUST00000157013 Ube2l3-004 17152318-17160075 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090192ENSMUST00000115700
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090192 14.333±2.90 26.515±1.58 25.698±12.61 11.660±0.91 22.669±3.35 12.671±1.16 18.089±1.26 23.593±10.78 12.962±0.76 24.861±0.84 11.761±5.59 25.909±13.63 3.786±0.00
ENSMUST00000115700 N/A 36.657±1.32 N/A N/A N/A N/A N/A 91.772±37.87 N/A N/A N/A 51.853±6.74 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PT CIL_0008PT_0002 VISTA 16:16870677-17470725
CIL_0004GO CIL_0004GO_0002 CGP 16:17144621-17202649

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000209 ISS protein polyubiquitination
GO:0003713 ISS transcription coactivator activity
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 ISS regulation of transcription, DNA-templated
GO:0008152 IEA metabolic process
GO:0008283 ISS cell proliferation
GO:0016567 ISS protein ubiquitination
GO:0016881 IEA acid-amino acid ligase activity
GO:0070979 ISS protein K11-linked ubiquitination
GO:0071383 ISS cellular response to steroid hormone stimulus
GO:0071385 ISS cellular response to glucocorticoid stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019188 ube2l3a ubiquitin-conjugating enzyme E2L 3a protein_coding Danio_rerio
ENSDARG00000027141 ube2l3b ubiquitin-conjugating enzyme E2L 3b protein_coding Danio_rerio
ENSG00000279392 AL158801.1 protein_coding Homo_sapiens

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