C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2L 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090192 Ube2l3-201 ENSMUSG00000038965 10090 - 16:17152015-17201492 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090192
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090192 14.333±2.90 26.515±1.58 25.698±12.61 11.660±0.91 22.669±3.35 12.671±1.16 18.089±1.26 23.593±10.78 12.962±0.76 24.861±0.84 11.761±5.59 25.909±13.63 3.786±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PT CIL_0008PT_0002 VISTA 16:16870677-17470725
CIL_0004GO CIL_0004GO_0002 CGP 16:17144621-17202649

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000209 ISS protein polyubiquitination
GO:0003713 ISS transcription coactivator activity
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 ISS regulation of transcription, DNA-templated
GO:0008283 ISS cell proliferation
GO:0016567 ISS protein ubiquitination
GO:0016881 IEA acid-amino acid ligase activity
GO:0070979 ISS protein K11-linked ubiquitination
GO:0071383 ISS cellular response to steroid hormone stimulus
GO:0071385 ISS cellular response to glucocorticoid stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254302 UBE2L2-001 processed_pseudogene Homo_sapiens 0 529
ENST00000342192 UBE2L3-001 protein_coding Homo_sapiens 0 1223
ENST00000436446 UBE2L5P-001 processed_pseudogene Homo_sapiens 0 737
ENST00000458578 UBE2L3-201 protein_coding Homo_sapiens 0 1142
ENST00000496722 UBE2L3-002 retained_intron Homo_sapiens 0 1140
ENST00000545681 UBE2L3-202 protein_coding Homo_sapiens 0 972
ENST00000555505 RP11-98L12.2-001 processed_pseudogene Homo_sapiens 0 545
ENST00000587688 UBE2L4-001 processed_pseudogene Homo_sapiens 0 691
ENST00000623123 AL158801.1-201 protein_coding Homo_sapiens 0 754

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