C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sialic acid binding Ig-like lectin F
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039013 Siglec5 10090 + 7:43351341-43359531 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000012798 Siglec5-001 43351395-43359470 protein_coding
  ENSMUST00000121494 Siglec5-004 43351548-43356618 protein_coding
  ENSMUST00000122423 Siglec5-003 43351408-43359531 protein_coding
  ENSMUST00000125335 Siglec5-005 43351383-43351843 processed_transcript
  ENSMUST00000145867 Siglec5-002 43351341-43359468 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000012798ENSMUST00000121494ENSMUST00000122423ENSMUST00000125335ENSMUST00000145867
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000012798 0.848±0.06 0.030±0.00 0.106±0.00 0.025±0.00 0.526±0.30 1.232±0.22 0.065±0.02 0.035±0.01 0.554±0.45 3.100±0.83 0.016±0.00 0.162±0.11 0.061±0.03 0.051±0.01
ENSMUST00000121494 0.117±0.00 0.080±0.06 N/A 0.091±0.00 0.282±0.00 N/A 0.054±0.02 0.041±0.01 0.051±0.04 N/A N/A 0.169±0.10 N/A 0.055±0.00
ENSMUST00000122423 0.383±0.00 N/A 0.033±0.00 0.025±0.01 0.304±0.01 0.720±0.34 N/A N/A 0.521±0.30 4.204±0.73 N/A 0.161±0.15 N/A 0.036±0.00
ENSMUST00000125335 0.399±0.00 0.606±0.35 N/A N/A N/A N/A N/A N/A 0.163±0.00 N/A N/A 0.422±0.11 N/A N/A
ENSMUST00000145867 0.144±0.04 N/A 0.109±0.06 N/A 0.125±0.00 N/A N/A N/A 0.567±0.16 N/A N/A 0.109±0.03 0.049±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0007155 IEA cell adhesion
GO:0016021 IEA integral component of membrane
GO:0048029 IDA monosaccharide binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089404 SIGLEC8 sialic acid binding Ig-like lectin 8 protein_coding Danio_rerio

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