C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sialic acid binding Ig-like lectin F
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000012798 Siglec5-001 ENSMUSG00000039013 10090 + 7:43351395-43359470 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000012798
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000012798 0.848±0.06 0.030±0.00 0.106±0.00 0.025±0.00 0.526±0.30 1.232±0.22 0.065±0.02 0.035±0.01 0.554±0.45 3.100±0.83 0.016±0.00 0.162±0.11 0.061±0.03 0.051±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007155 IEA cell adhesion
GO:0016021 IEA integral component of membrane
GO:0048029 IDA monosaccharide binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000250360 SIGLEC9-001 protein_coding Homo_sapiens 1e-24 119
ENST00000317643 SIGLEC7-002 protein_coding Homo_sapiens 5e-23 113
ENST00000440804 SIGLEC9-002 protein_coding Homo_sapiens 1e-24 119

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