C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: MYCBP associated protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039110 Mycbpap 10090 - 11:94501347-94521742 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040692 Mycbpap-003 94501347-94507355 protein_coding
  ENSMUST00000093945 Mycbpap-001 94501347-94521742 protein_coding
  ENSMUST00000123496 Mycbpap-002 94501347-94521742 retained_intron
  ENSMUST00000139432 Mycbpap-005 94501347-94503571 processed_transcript
  ENSMUST00000149872 Mycbpap-006 94503006-94503558 retained_intron
  ENSMUST00000151993 Mycbpap-004 94507700-94510161 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040692ENSMUST00000093945ENSMUST00000123496ENSMUST00000139432ENSMUST00000151993
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040692 0.015±0.00 0.056±0.00 N/A 0.196±0.00 N/A N/A N/A N/A 0.037±0.01 N/A 0.043±0.00 1.626±0.20 N/A 43.571±28.80
ENSMUST00000093945 0.057±0.01 0.148±0.06 0.249±0.03 0.261±0.07 N/A 0.393±0.00 0.105±0.07 0.309±0.14 0.023±0.01 0.896±0.56 0.011±0.00 1.170±1.09 0.527±0.17 21.764±2.14
ENSMUST00000123496 0.408±0.01 0.467±0.14 0.451±0.15 0.445±0.32 0.390±0.23 1.187±0.36 0.050±0.01 1.074±0.21 0.026±0.01 2.356±0.66 N/A 1.284±0.63 1.163±0.85 10.653±0.00
ENSMUST00000139432 N/A N/A N/A N/A N/A N/A 0.259±0.00 N/A N/A N/A 0.232±0.00 N/A N/A N/A
ENSMUST00000151993 N/A N/A N/A N/A 0.515±0.00 N/A 0.125±0.00 N/A 0.019±0.00 N/A 0.119±0.00 2.964±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00039I CIL_00039I_0002 CGP 11:94489599-94521742

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0007268 ISS synaptic transmission
GO:0007275 IEA multicellular organismal development
GO:0007283 ISS spermatogenesis
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069194 mycbpap mycbp associated protein protein_coding Danio_rerio
ENSG00000136449 MYCBPAP MYCBP associated protein protein_coding Homo_sapiens

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