C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: MYCBP associated protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000136449 MYCBPAP 9606 + 17:50508384-50531501 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000323776 MYCBPAP-001 50508384-50531497 protein_coding
  ENST00000419930 MYCBPAP-004 50508490-50510420 protein_coding
  ENST00000436259 MYCBPAP-201 50508384-50530239 protein_coding
  ENST00000437498 MYCBPAP-002 50508622-50531497 nonsense_mediated_decay
  ENST00000452039 MYCBPAP-006 50508541-50519089 protein_coding
  ENST00000458692 MYCBPAP-005 50508588-50518633 nonsense_mediated_decay
  ENST00000459754 MYCBPAP-008 50520994-50523052 retained_intron
  ENST00000468821 MYCBPAP-007 50519410-50520221 processed_transcript
  ENST00000470609 MYCBPAP-003 50508425-50522666 retained_intron
  ENST00000477744 MYCBPAP-010 50529178-50531500 nonsense_mediated_decay
  ENST00000485169 MYCBPAP-009 50525973-50528840 nonsense_mediated_decay
  ENST00000488432 MYCBPAP-011 50523720-50531501 protein_coding
  ENST00000573066 MYCBPAP-012 50530154-50531501 retained_intron
  ENST00000576179 MYCBPAP-013 50508449-50516093 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000323776ENST00000419930ENST00000436259ENST00000437498ENST00000452039ENST00000458692ENST00000459754ENST00000470609ENST00000477744ENST00000485169ENST00000488432ENST00000573066ENST00000576179
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000323776 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.176±0.00 N/A 0.276±0.00 N/A 25.688±5.88
ENST00000419930 N/A N/A N/A N/A N/A N/A 0.119±0.00 N/A N/A N/A N/A 0.182±0.00 N/A N/A
ENST00000436259 N/A N/A N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A N/A N/A 0.048±0.00 26.315±0.00
ENST00000437498 N/A 0.118±0.00 N/A 0.152±0.00 0.093±0.00 N/A 0.034±0.00 0.079±0.00 N/A 0.048±0.00 N/A 0.213±0.00 0.065±0.00 5.962±0.00
ENST00000452039 N/A N/A 0.361±0.00 N/A 0.154±0.00 0.404±0.00 0.185±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000458692 N/A N/A N/A 0.422±0.00 0.518±0.00 N/A N/A N/A 0.070±0.00 0.828±0.00 N/A N/A 0.126±0.08 N/A
ENST00000459754 N/A N/A N/A 0.196±0.00 N/A N/A N/A N/A N/A 0.368±0.00 N/A N/A N/A N/A
ENST00000470609 0.072±0.00 N/A N/A N/A 0.035±0.00 0.151±0.00 0.071±0.00 0.147±0.00 N/A N/A 0.024±0.00 0.298±0.10 N/A N/A
ENST00000477744 N/A N/A N/A N/A N/A 0.381±0.00 N/A N/A N/A N/A N/A 0.966±0.00 N/A N/A
ENST00000485169 N/A N/A 0.360±0.00 0.425±0.00 N/A 0.261±0.00 N/A 0.658±0.00 N/A N/A N/A N/A 0.081±0.00 82.743±0.00
ENST00000488432 N/A N/A N/A N/A 0.347±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573066 1.619±0.00 3.396±0.00 N/A 1.875±0.00 1.471±0.00 N/A 0.996±0.00 4.008±0.00 0.582±0.00 4.059±0.00 0.559±0.00 N/A N/A N/A
ENST00000576179 N/A 0.873±0.00 N/A N/A N/A N/A 0.416±0.00 N/A 0.426±0.00 N/A 0.644±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088W CIL_00088W_0001 VISTA 17:49956976-50560219

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0007268 ISS synaptic transmission
GO:0007275 IEA multicellular organismal development
GO:0007283 IEP spermatogenesis
GO:0016020 IEA membrane
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069194 mycbpap mycbp associated protein protein_coding Danio_rerio
ENSMUSG00000039110 Mycbpap MYCBP associated protein protein_coding Mus_musculus

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