C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein phosphatase 1, regulatory subunit 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039220 Ppp1r10 10090 + 17:35916434-35932283 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000087210 Ppp1r10-201 35917196-35932281 protein_coding
  ENSMUST00000087211 Ppp1r10-001 35916566-35932283 protein_coding
  ENSMUST00000130124 Ppp1r10-003 35916579-35917340 processed_transcript
  ENSMUST00000133641 Ppp1r10-002 35916782-35918358 retained_intron
  ENSMUST00000151375 Ppp1r10-006 35926494-35928329 retained_intron
  ENSMUST00000151664 Ppp1r10-005 35916998-35924295 protein_coding
  ENSMUST00000154856 Ppp1r10-004 35916434-35917764 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000087210ENSMUST00000087211ENSMUST00000133641
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000087210 8.864±1.84 16.761±1.64 18.262±3.16 12.884±4.85 15.563±7.81 5.546±0.99 9.793±1.74 11.258±3.77 12.080±3.49 4.217±0.86 20.629±6.11 13.529±5.26 22.602±6.69
ENSMUST00000087211 N/A N/A N/A 1.775±0.00 N/A N/A N/A N/A N/A N/A 6.214±1.71 5.496±0.00 5.011±0.00
ENSMUST00000133641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.773±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0002 VISTA 17:35419853-36021785

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000785 IDA chromatin
GO:0003677 IEA DNA binding
GO:0004864 IEA protein phosphatase inhibitor activity
GO:0005515 IPI protein binding
GO:0006351 IEA transcription, DNA-templated
GO:0043086 IEA negative regulation of catalytic activity
GO:0044822 IEA poly(A) RNA binding
GO:0046872 IEA metal ion binding
GO:0072357 IDA PTW/PP1 phosphatase complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032651 ppp1r10 protein phosphatase 1, regulatory subunit 10 protein_coding Danio_rerio
ENSG00000204569 PPP1R10 protein phosphatase 1, regulatory subunit 10 protein_coding Homo_sapiens

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