C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA E130309D02 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039244 E130309D02Rik 10090 - 5:143301195-143315360 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046418 E130309D02Rik-001 143301207-143315360 protein_coding
  ENSMUST00000159406 E130309D02Rik-005 143301195-143315064 processed_transcript
  ENSMUST00000160498 E130309D02Rik-002 143301209-143315131 retained_intron
  ENSMUST00000162332 E130309D02Rik-003 143308303-143315340 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046418ENSMUST00000159406ENSMUST00000160498ENSMUST00000162332
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046418 6.665±0.54 18.327±1.04 4.590±0.45 9.308±3.83 10.066±4.32 9.880±1.19 4.802±0.63 7.320±0.22 6.708±2.97 9.505±0.60 4.599±0.82 11.395±2.41 22.187±13.39 7.499±2.60
ENSMUST00000159406 N/A N/A N/A 5.057±0.00 N/A N/A N/A N/A N/A N/A 0.797±0.00 N/A 10.829±5.59 0.954±0.00
ENSMUST00000160498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.427±0.10 N/A N/A
ENSMUST00000162332 N/A 8.920±2.24 N/A N/A N/A N/A N/A N/A N/A 4.255±0.00 N/A 3.996±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000854 CIL_000854_0002 VISTA 5:142700569-143309825

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037652 C1H7orf26 chromosome 7 open reading frame 26 protein_coding Danio_rerio
ENSG00000146576 C7orf26 chromosome 7 open reading frame 26 protein_coding Homo_sapiens

Loading