C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA E130309D02 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000046418 E130309D02Rik-001 ENSMUSG00000039244 10090 - 5:143301207-143315360 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046418
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046418 6.665±0.54 18.327±1.04 4.590±0.45 9.308±3.83 10.066±4.32 9.880±1.19 4.802±0.63 7.320±0.22 6.708±2.97 9.505±0.60 4.599±0.82 11.395±2.41 22.187±13.39 7.499±2.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000854 CIL_000854_0002 VISTA 5:142700569-143309825

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000344417 C7orf26-001 protein_coding Homo_sapiens 0 1628
ENST00000359073 C7orf26-002 protein_coding Homo_sapiens 0 547
ENST00000440409 C7orf26-005 nonsense_mediated_decay Homo_sapiens 0 226
ENST00000445375 C7orf26-007 protein_coding Homo_sapiens 0 366
ENST00000472693 C7orf26-003 processed_transcript Homo_sapiens 0 948
ENST00000477298 C7orf26-004 retained_intron Homo_sapiens 0 414

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