C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: radial spoke head 4 homolog A (Chlamydomonas)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039552 Rsph4a 10090 + 10:33905111-33916021 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000118315 Rsph4a-001 33905485-33915883 protein_coding
  ENSMUST00000169670 Rsph4a-201 33905111-33916021 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118315ENSMUST00000169670
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118315 0.024±0.01 0.055±0.01 N/A 0.439±0.30 0.028±0.00 0.036±0.00 0.009±0.00 0.012±0.00 0.008±0.00 N/A 0.009±0.00 1.645±1.34 0.019±0.01 0.285±0.00
ENSMUST00000169670 0.017±0.00 0.092±0.02 0.533±0.03 0.195±0.03 N/A 0.039±0.01 0.135±0.05 0.053±0.03 0.232±0.17 1.640±0.33 N/A 1.212±0.62 0.069±0.03 0.060±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005H0 CIL_0005H0_0002 CGP 10:33905111-33951212

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001534 ISS radial spoke
GO:0003341 IEA cilium movement
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005856 IEA cytoskeleton
GO:0035082 IEA axoneme assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000067606 rsph4a radial spoke head 4 homolog A (Chlamydomonas) protein_coding Danio_rerio
ENSG00000111834 RSPH4A radial spoke head 4 homolog A (Chlamydomonas) protein_coding Homo_sapiens

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