C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polymerase (RNA) II (DNA directed) polypeptide J
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039771 Polr2j 10090 + 5:136116631-136122947 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041366 Polr2j-001 136116631-136122947 protein_coding
  ENSMUST00000111127 Polr2j-003 136116631-136122723 protein_coding
  ENSMUST00000111129 Polr2j-002 136116702-136122936 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000041366ENSMUST00000111129
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000041366 38.644±5.45 18.786±3.56 51.783±10.95 41.501±23.71 23.166±4.49 21.997±2.20 24.185±2.91 36.539±3.22 52.105±42.89 18.538±3.42 29.537±2.11 36.180±14.04 41.418±23.52
ENSMUST00000111129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 30.237±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001055 IBA RNA polymerase II activity
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005665 IDA DNA-directed RNA polymerase II, core complex
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0030275 IEA LRR domain binding
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035146 polr2j polymerase (RNA) II (DNA directed) polypeptide J protein_coding Danio_rerio
ENSG00000005075 POLR2J polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa protein_coding Homo_sapiens

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