C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phospholipase C, beta 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039943 Plcb4 10090 + 2:135659011-136014593 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035646 Plcb4-201 135805548-136013068 protein_coding
  ENSMUST00000110109 Plcb4-002 135741830-136014593 protein_coding
  ENSMUST00000127044 Plcb4-009 135887694-135939306 processed_transcript
  ENSMUST00000127729 Plcb4-014 135764911-135908408 processed_transcript
  ENSMUST00000132686 Plcb4-011 135946471-135950306 processed_transcript
  ENSMUST00000134310 Plcb4-001 135659711-135983013 protein_coding
  ENSMUST00000137969 Plcb4-006 135741830-135910484 retained_intron
  ENSMUST00000139480 Plcb4-005 135659554-135742838 processed_transcript
  ENSMUST00000141025 Plcb4-010 135942073-135950353 processed_transcript
  ENSMUST00000144931 Plcb4-004 135659011-135742751 processed_transcript
  ENSMUST00000146018 Plcb4-008 135659615-135877821 retained_intron
  ENSMUST00000147122 Plcb4-013 136007230-136008043 processed_transcript
  ENSMUST00000147744 Plcb4-003 135987876-136014593 protein_coding
  ENSMUST00000150072 Plcb4-012 135983029-135988196 processed_transcript
  ENSMUST00000184371 Plcb4-007 135741830-136013269 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035646ENSMUST00000110109ENSMUST00000127729ENSMUST00000134310ENSMUST00000137969ENSMUST00000139480ENSMUST00000144931ENSMUST00000147744ENSMUST00000150072ENSMUST00000184371
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035646 N/A N/A N/A 8.633±0.00 N/A N/A N/A N/A 0.142±0.00 N/A N/A 1.355±0.33 1.319±0.08 2.557±0.00
ENSMUST00000110109 N/A 1.593±0.00 26.202±0.00 5.832±2.49 1.221±0.19 2.828±0.00 3.072±1.71 0.906±0.00 0.333±0.16 4.716±0.00 1.293±0.87 1.082±0.31 0.895±0.11 N/A
ENSMUST00000127729 N/A N/A N/A N/A N/A N/A N/A N/A 0.958±0.00 N/A N/A 6.781±0.00 N/A N/A
ENSMUST00000134310 N/A 1.412±0.16 N/A N/A 1.756±0.00 N/A N/A N/A 0.153±0.08 N/A N/A 1.833±0.66 N/A N/A
ENSMUST00000137969 N/A 7.071±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139480 N/A N/A N/A N/A N/A 4.123±0.00 N/A N/A 0.156±0.04 N/A N/A 2.974±1.28 N/A N/A
ENSMUST00000144931 N/A N/A N/A N/A N/A N/A N/A N/A 0.078±0.00 N/A N/A N/A N/A N/A
ENSMUST00000147744 8.001±4.73 1.477±0.00 42.797±11.48 5.732±2.66 4.102±1.17 N/A 6.916±1.97 1.183±0.37 0.662±0.50 5.701±1.60 1.813±0.61 3.448±1.76 3.141±0.60 2.161±0.00
ENSMUST00000150072 N/A N/A N/A N/A N/A N/A N/A N/A 0.512±0.00 N/A N/A N/A N/A N/A
ENSMUST00000184371 N/A 1.787±0.00 17.326±0.00 N/A N/A N/A N/A 0.779±0.00 N/A N/A N/A 2.403±0.93 2.012±0.93 1.591±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PB CIL_0001PB_0002 CGP 2:134786159-136014593
CIL_00043I CIL_00043I_0002 CGP 2:135659011-136069917

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004435 IEA phosphatidylinositol phospholipase C activity
GO:0004871 IEA signal transducer activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005790 IDA smooth endoplasmic reticulum
GO:0006629 IEA lipid metabolic process
GO:0014069 IDA postsynaptic density
GO:0016042 IEA lipid catabolic process
GO:0030425 IDA dendrite
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000101333 PLCB4 phospholipase C, beta 4 protein_coding Homo_sapiens

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