C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: importin 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040029 Ipo8 10090 - 6:148770683-148831467 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000048418 Ipo8-002 148770683-148831467 protein_coding
  ENSMUST00000123842 Ipo8-006 148784586-148798801 retained_intron
  ENSMUST00000136896 Ipo8-004 148770683-148789991 retained_intron
  ENSMUST00000144357 Ipo8-005 148801913-148817772 processed_transcript
  ENSMUST00000145743 Ipo8-003 148790945-148824466 retained_intron
  ENSMUST00000145960 Ipo8-001 148801916-148831426 protein_coding
  ENSMUST00000147955 Ipo8-007 148776896-148782642 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048418ENSMUST00000136896ENSMUST00000147955
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048418 6.126±2.93 6.363±0.98 6.305±1.32 4.060±0.05 4.890±1.42 7.166±1.17 3.961±0.78 8.719±1.53 6.499±2.91 8.334±1.17 2.508±0.56 6.679±1.82 4.236±1.13 1.378±0.41
ENSMUST00000136896 N/A N/A 0.975±0.07 0.820±0.06 N/A N/A N/A N/A 0.448±0.00 N/A 0.322±0.00 1.035±0.08 N/A N/A
ENSMUST00000147955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.108±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006HS CIL_0006HS_0002 CGP 6:148770683-148896237

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005887 ISA integral component of plasma membrane
GO:0006810 ISA transport
GO:0006886 IEA intracellular protein transport
GO:0008536 IEA Ran GTPase binding
GO:0042626 ISA ATPase activity, coupled to transmembrane movement of substances
GO:0055085 ISA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058159 ipo8 importin 8 protein_coding Danio_rerio
ENSG00000133704 IPO8 importin 8 protein_coding Homo_sapiens

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