C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: importin 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048418 Ipo8-002 ENSMUSG00000040029 10090 - 6:148770683-148831467 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048418
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048418 6.126±2.93 6.363±0.98 6.305±1.32 4.060±0.05 4.890±1.42 7.166±1.17 3.961±0.78 8.719±1.53 6.499±2.91 8.334±1.17 2.508±0.56 6.679±1.82 4.236±1.13 1.378±0.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006HS CIL_0006HS_0002 CGP 6:148770683-148896237

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005887 ISA integral component of plasma membrane
GO:0006810 ISA transport
GO:0006886 IEA intracellular protein transport
GO:0008536 IEA Ran GTPase binding
GO:0042626 ISA ATPase activity, coupled to transmembrane movement of substances
GO:0055085 ISA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000128937 ipo8-001 protein_coding Danio_rerio 0 239
ENSDART00000156946 ipo8-201 protein_coding Danio_rerio 0 222
ENST00000256079 IPO8-001 protein_coding Homo_sapiens 0 3391
ENST00000358724 IPO8-006 protein_coding Homo_sapiens 1e-33 147
ENST00000535989 IPO8-009 protein_coding Homo_sapiens 0 514
ENST00000540979 IPO8-008 nonsense_mediated_decay Homo_sapiens 0 534
ENST00000542464 IPO8-003 protein_coding Homo_sapiens 0 531
ENST00000543446 IPO8-007 protein_coding Homo_sapiens 0 198
ENST00000544829 IPO8-002 protein_coding Homo_sapiens 0 2562

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