C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: golgin, RAB6-interacting
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040124 Gorab 10090 - 1:163384908-163403669 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000045138 Gorab-001 163384908-163403669 protein_coding
  ENSMUST00000185299 Gorab-003 163394416-163403611 retained_intron
  ENSMUST00000186402 Gorab-002 163384912-163403656 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045138ENSMUST00000185299ENSMUST00000186402
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045138 1.557±0.57 0.903±0.38 2.806±0.11 3.135±0.77 0.874±0.24 1.901±0.44 0.439±0.19 1.092±0.23 1.033±0.56 1.233±0.46 0.778±0.20 2.353±0.75 2.706±1.12 0.818±0.43
ENSMUST00000185299 N/A 0.577±0.13 N/A N/A N/A N/A 0.430±0.07 N/A 0.257±0.00 N/A N/A N/A N/A N/A
ENSMUST00000186402 N/A 0.359±0.22 N/A N/A 0.902±0.16 N/A N/A 0.213±0.00 0.838±0.00 0.688±0.23 N/A 1.465±1.05 N/A 0.196±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IDA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042031 gorab golgin, rab6-interacting protein_coding Danio_rerio
ENSG00000120370 GORAB golgin, RAB6-interacting protein_coding Homo_sapiens

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