C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: golgin, RAB6-interacting
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000120370 GORAB 9606 + 1:170532129-170553446 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000367762 GORAB-002 170532131-170545789 protein_coding
  ENST00000367763 GORAB-001 170532129-170553446 protein_coding
  ENST00000465717 GORAB-006 170536275-170539659 processed_transcript
  ENST00000475113 GORAB-007 170544640-170552276 retained_intron
  ENST00000498166 GORAB-004 170532151-170553446 nonsense_mediated_decay
  ENST00000498600 GORAB-005 170539062-170553446 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000367762ENST00000367763ENST00000465717ENST00000475113ENST00000498166ENST00000498600
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000367762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.181±0.00 N/A N/A N/A
ENST00000367763 0.559±0.00 1.615±0.00 0.160±0.00 N/A 0.703±0.16 0.849±0.21 1.007±0.00 1.298±0.00 0.931±0.33 2.005±0.00 N/A 1.839±0.94 1.409±0.09 3.608±0.00
ENST00000465717 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.459±0.00 N/A N/A N/A N/A
ENST00000475113 1.107±0.00 N/A N/A 0.929±0.00 4.491±0.00 2.591±0.00 N/A N/A 4.150±0.00 N/A N/A 9.247±3.96 5.995±0.00 12.489±0.00
ENST00000498166 N/A 1.983±0.00 0.084±0.00 0.605±0.00 0.452±0.00 0.298±0.00 0.282±0.00 N/A 0.152±0.00 0.227±0.00 N/A 0.947±0.22 N/A 1.345±0.62
ENST00000498600 N/A N/A 0.151±0.00 0.321±0.00 N/A N/A 0.262±0.00 N/A N/A 0.809±0.00 N/A 0.959±0.00 N/A 1.852±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000280 CIL_000280_0002 CGP 1:170146001-170553446
CIL_000284 CIL_000284_0002 CGP 1:170532129-170739419

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 ISS cytoplasm
GO:0005794 IDA Golgi apparatus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042031 gorab golgin, rab6-interacting protein_coding Danio_rerio
ENSMUSG00000040124 Gorab golgin, RAB6-interacting protein_coding Mus_musculus

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