C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dynamin 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040265 Dnm3 10090 - 1:161982453-162478034 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000070330 Dnm3-006 161990212-162478034 protein_coding
  ENSMUST00000086074 Dnm3-001 161987302-162478034 protein_coding
  ENSMUST00000159763 Dnm3-003 161982453-162295636 protein_coding
  ENSMUST00000160173 Dnm3-007 162282528-162313683 processed_transcript
  ENSMUST00000160665 Dnm3-004 162006122-162295580 protein_coding
  ENSMUST00000161155 Dnm3-002 162318171-162478012 retained_intron
  ENSMUST00000161539 Dnm3-005 162016453-162134752 processed_transcript
  ENSMUST00000161894 Dnm3-009 162386023-162424589 processed_transcript
  ENSMUST00000162330 Dnm3-008 162273290-162295595 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000070330ENSMUST00000086074ENSMUST00000159763ENSMUST00000160173ENSMUST00000160665ENSMUST00000161539
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000070330 N/A N/A N/A N/A 0.320±0.01 0.205±0.01 N/A N/A 0.025±0.00 N/A N/A N/A 0.056±0.03 N/A
ENSMUST00000086074 0.221±0.00 0.414±0.14 0.248±0.02 12.789±2.76 0.219±0.10 0.261±0.08 0.223±0.00 0.523±0.25 0.048±0.02 0.315±0.01 0.237±0.14 0.385±0.13 0.062±0.07 N/A
ENSMUST00000159763 N/A 0.561±0.08 N/A N/A 0.408±0.00 0.339±0.07 N/A N/A 0.113±0.03 N/A 0.682±0.05 1.018±0.00 0.063±0.03 N/A
ENSMUST00000160173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.455±0.00
ENSMUST00000160665 N/A N/A N/A N/A 0.685±0.00 0.234±0.00 0.411±0.00 1.476±0.26 0.234±0.11 0.843±0.00 0.704±0.00 1.093±0.21 0.319±0.00 2.884±0.27
ENSMUST00000161539 N/A N/A N/A N/A N/A N/A N/A N/A 0.036±0.00 N/A N/A N/A 0.015±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007X6 CIL_0007X6_0002 VISTA 1:161774031-162377560
CIL_0005CT CIL_0005CT_0002 CGP 1:161969186-162478034

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005515 IEA protein binding
GO:0005525 IEA GTP binding
GO:0005739 IDA mitochondrion
GO:0005874 IEA microtubule
GO:0006184 IEA GTP catabolic process
GO:0006897 IEA endocytosis
GO:0007416 IEA synapse assembly
GO:0014069 IEA postsynaptic density
GO:0043197 IEA dendritic spine
GO:0046847 IEA filopodium assembly
GO:0048471 IEA perinuclear region of cytoplasm
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032238 dnm3 dynamin 3 protein_coding Danio_rerio
ENSG00000197959 DNM3 dynamin 3 protein_coding Homo_sapiens

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