C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 1700019B03 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040340 1700019B03Rik 10090 + 8:3470862-3487181 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047265 1700019B03Rik-201 3470862-3487178 protein_coding
  ENSMUST00000159076 1700019B03Rik-002 3470862-3487178 nonsense_mediated_decay
  ENSMUST00000161680 1700019B03Rik-001 3475849-3487181 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047265ENSMUST00000159076ENSMUST00000161680
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047265 0.035±0.00 0.155±0.00 0.057±0.02 0.058±0.00 N/A N/A 0.038±0.02 0.064±0.05 0.037±0.01 N/A N/A 0.263±0.24 26.880±16.55
ENSMUST00000159076 0.035±0.01 0.085±0.02 0.038±0.02 0.056±0.00 N/A N/A 0.015±0.00 0.058±0.02 0.035±0.00 0.032±0.00 N/A 0.027±0.00 N/A
ENSMUST00000161680 0.050±0.03 0.075±0.04 0.163±0.00 0.067±0.03 0.079±0.04 0.024±0.01 0.053±0.01 0.017±0.02 0.150±0.02 N/A 0.110±0.06 0.055±0.03 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004XK CIL_0004XK_0002 CGP 8:3457105-3487181

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000198723 C19orf45 chromosome 19 open reading frame 45 protein_coding Homo_sapiens

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