C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cerebellin 3 precursor protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040380 Cbln3 10090 - 14:55878920-55884256 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000063871 Cbln3-201 55878920-55884256 protein_coding
  ENSMUST00000172378 Cbln3-202 55882061-55884232 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000063871ENSMUST00000172378
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000063871 0.069±0.03 0.045±0.02 0.089±0.02 0.127±0.05 0.069±0.04 0.496±0.19 0.025±0.01 0.044±0.02 0.144±0.07 0.057±0.02 0.017±0.01 0.110±0.04 0.232±0.12 0.098±0.02
ENSMUST00000172378 0.058±0.00 0.105±0.05 0.130±0.00 N/A 0.114±0.03 1.112±0.33 0.019±0.01 0.010±0.00 0.269±0.13 0.134±0.07 0.024±0.01 0.243±0.10 0.420±0.34 0.212±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004O9 CIL_0004O9_0002 CGP 14:55854036-55884256
CIL_0004O8 CIL_0004O8_0002 CGP 14:55878920-55896781

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0008150 ND biological_process
GO:0030054 IEA cell junction
GO:0045202 IDA synapse

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057296 cbln1 cerebellin 1 precursor protein_coding Danio_rerio
ENSG00000139899 CBLN3 cerebellin 3 precursor protein_coding Homo_sapiens

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