C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: A kinase (PRKA) anchor protein (yotiao) 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040407 Akap9 10090 + 5:3928054-4080209 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000044492 Akap9-001 3928274-4080209 protein_coding
  ENSMUST00000123119 Akap9-006 3971972-3981324 retained_intron
  ENSMUST00000132058 Akap9-002 3928054-3954765 retained_intron
  ENSMUST00000133952 Akap9-008 3975616-3976531 retained_intron
  ENSMUST00000140977 Akap9-005 3951290-3957654 processed_transcript
  ENSMUST00000141817 Akap9-004 3928274-3948954 retained_intron
  ENSMUST00000143365 Akap9-003 3928178-3960989 protein_coding
  ENSMUST00000147629 Akap9-007 4065296-4070442 nonsense_mediated_decay
  ENSMUST00000176863 Akap9-010 4064374-4065376 protein_coding
  ENSMUST00000177448 Akap9-009 3954715-3957710 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044492ENSMUST00000132058ENSMUST00000141817
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044492 0.585±0.18 1.090±0.17 4.406±0.23 14.853±1.93 1.126±0.16 1.551±0.40 0.800±0.28 0.845±0.07 1.311±0.93 1.192±0.39 1.716±1.06 5.018±5.85 4.625±3.44 3.604±4.46
ENSMUST00000132058 N/A N/A N/A N/A 0.651±0.00 N/A N/A N/A N/A N/A N/A 1.080±0.14 N/A N/A
ENSMUST00000141817 N/A 15.188±5.64 N/A N/A 4.517±0.64 7.988±0.00 N/A N/A N/A N/A N/A 14.794±3.93 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004SZ CIL_0004SZ_0003 CGP 5:3890581-4080209
CIL_0006E3 CIL_0006E3_0002 CGP 5:3928054-4104746

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000242 IDA pericentriolar material
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005813 ISO centrosome
GO:0007165 IEA signal transduction
GO:0007283 IMP spermatogenesis
GO:0008076 IEA voltage-gated potassium channel complex
GO:0032947 IEA protein complex scaffold
GO:0036064 IDA ciliary basal body
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0044325 IEA ion channel binding
GO:0060009 IMP Sertoli cell development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077668 CABZ01010103.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000079610 akap9 A kinase (PRKA) anchor protein (yotiao) 9 protein_coding Danio_rerio
ENSDARG00000086145 CABZ01010098.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000127914 AKAP9 A kinase (PRKA) anchor protein 9 protein_coding Homo_sapiens

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