C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004SZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000086107-ENSDARG00000086145 CGP 7955 19:442500-485015
GeneTranscriptPositionBiotype
ENSDARG00000086107 (MTERF1)
mitochondrial transcription termination factor 1 		ENSDART00000127985 (MTERF1-201) 442500-446358 protein_coding
ENSDARG00000086145 (CABZ01010098.1)
Uncharacterized protein 		ENSDART00000131074 (CABZ01010098.1-201) 477578-485015 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0004SZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000127989-ENSG00000127914 CGP 9606 7:91692008-92110673
GeneTranscriptPositionBiotype
ENSG00000127914 (AKAP9)
A kinase (PRKA) anchor protein 9 		ENST00000356239 (AKAP9-001) 91940867-92110673 protein_coding
ENST00000358100 (AKAP9-201) 91941100-92090621 protein_coding
ENST00000359028 (AKAP9-202) 91941100-92110673 protein_coding
ENST00000394534 (AKAP9-006) 92070138-92109061 protein_coding
ENST00000394564 (AKAP9-002) 91940926-91996052 protein_coding
ENST00000435423 (AKAP9-005) 92083576-92090641 protein_coding
ENST00000438114 (AKAP9-011) 91973756-91995713 protein_coding
ENST00000463118 (AKAP9-013) 92098154-92107512 retained_intron
ENST00000484815 (AKAP9-008) 92040704-92043143 retained_intron
ENST00000486313 (AKAP9-010) 92102589-92110467 processed_transcript
ENST00000487258 (AKAP9-007) 92091989-92110668 retained_intron
ENST00000487692 (AKAP9-012) 92097160-92100042 retained_intron
ENST00000491695 (AKAP9-004) 92057626-92065454 processed_transcript
ENST00000493453 (AKAP9-003) 91940916-92041781 retained_intron
ENST00000493976 (AKAP9-009) 92105677-92107929 retained_intron
ENST00000619023 (AKAP9-203) 91940916-92041781 protein_coding
ENSG00000127989 (MTERF1)
mitochondrial transcription termination factor 1 		ENST00000351870 (MTERF1-003) 91872891-91880720 protein_coding
ENST00000406735 (MTERF1-004) 91873322-91880692 protein_coding
ENST00000419292 (MTERF1-002) 91870929-91880702 protein_coding
ENST00000425936 (MTERF1-005) 91874654-91880663 protein_coding
ENST00000442961 (MTERF1-008) 91874318-91880690 protein_coding
ENST00000454222 (MTERF1-009) 91692008-91880690 processed_transcript
ENST00000456229 (MTERF1-007) 91874315-91880679 protein_coding
ENST00000481516 (MTERF1-006) 91876895-91880439 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_0004SZ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040429-ENSMUSG00000040407 CGP 10090 5:3890581-4080209
GeneTranscriptPositionBiotype
ENSMUSG00000040407 (Akap9)
A kinase (PRKA) anchor protein (yotiao) 9 		ENSMUST00000044492 (Akap9-001) 3928274-4080209 protein_coding
ENSMUST00000123119 (Akap9-006) 3971972-3981324 retained_intron
ENSMUST00000132058 (Akap9-002) 3928054-3954765 retained_intron
ENSMUST00000133952 (Akap9-008) 3975616-3976531 retained_intron
ENSMUST00000140977 (Akap9-005) 3951290-3957654 processed_transcript
ENSMUST00000141817 (Akap9-004) 3928274-3948954 retained_intron
ENSMUST00000143365 (Akap9-003) 3928178-3960989 protein_coding
ENSMUST00000147629 (Akap9-007) 4065296-4070442 nonsense_mediated_decay
ENSMUST00000176863 (Akap9-010) 4064374-4065376 protein_coding
ENSMUST00000177448 (Akap9-009) 3954715-3957710 retained_intron
ENSMUSG00000040429 (Mterf1a)
mitochondrial transcription termination factor 1a 		ENSMUST00000044746 (Mterf1a-001) 3890581-3893933 protein_coding
ENSMUST00000117463 (Mterf1a-002) 3890584-3893907 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004SZ_0001ENSDARG00000086107ENSDART00000127985ENSDARG00000086145ENSDART00000131074CIL_0004SZ_0002ENSG00000127914ENST00000356239ENST00000358100ENST00000359028ENST00000394534ENST00000394564ENST00000435423ENST00000438114ENST00000463118ENST00000484815ENST00000486313ENST00000487258ENST00000487692ENST00000491695ENST00000493453ENST00000493976ENST00000619023ENSG00000127989ENST00000351870ENST00000406735ENST00000419292ENST00000425936ENST00000442961ENST00000454222ENST00000456229ENST00000481516CIL_0004SZ_0003ENSMUSG00000040407ENSMUST00000044492ENSMUST00000123119ENSMUST00000132058ENSMUST00000133952ENSMUST00000140977ENSMUST00000141817ENSMUST00000143365ENSMUST00000147629ENSMUST00000176863ENSMUST00000177448ENSMUSG00000040429ENSMUST00000044746ENSMUST00000117463
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004SZ_0001ENSDARG00000086107ENSDART00000127985ENSDARG00000086145ENSDART00000131074CIL_0004SZ_0002ENSG00000127914ENST00000356239ENST00000358100ENST00000394534ENST00000487258ENST00000487692ENST00000493453ENST00000619023ENSG00000127989ENST00000351870ENST00000406735ENST00000419292ENST00000425936ENST00000442961ENST00000481516CIL_0004SZ_0003ENSMUSG00000040407ENSMUST00000044492ENSMUST00000132058ENSMUST00000141817ENSMUSG00000040429ENSMUST00000044746ENSMUST00000117463
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000086107 ENSDART00000127985 N/A N/A N/A 1.626±0.36 N/A N/A 2.075±0.69 4.362±2.02 0.605±0.00 N/A 3.201±0.00 N/A N/A N/A
ENSDARG00000086145 ENSDART00000131074 N/A N/A N/A 3.207±2.21 N/A N/A 1.842±0.58 1.568±0.00 1.950±0.00 N/A 1.674±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000127914 ENST00000356239 1.449±0.00 1.177±0.00 0.636±0.00 0.702±0.11 N/A 1.425±0.00 2.642±0.00 N/A 1.034±0.22 0.450±0.00 1.263±0.00 0.925±0.32 0.132±0.00 1.119±0.00
ENST00000358100 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.737±0.00 N/A 2.174±0.00 N/A N/A
ENST00000359028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394534 1.208±0.00 2.114±0.00 2.957±0.00 1.066±0.15 2.907±1.11 3.569±0.00 1.523±0.73 3.895±1.43 2.132±0.39 1.652±0.00 3.290±0.00 2.864±0.24 0.406±0.13 2.118±0.00
ENST00000394564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487258 1.265±0.00 3.094±0.00 N/A 1.356±0.00 1.351±0.00 N/A N/A 3.253±0.00 2.429±0.00 1.528±0.00 N/A 4.123±1.99 0.774±0.03 1.187±0.00
ENST00000487692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 93.170±0.00 N/A N/A
ENST00000491695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493453 N/A N/A N/A N/A N/A N/A N/A N/A 1.255±0.00 N/A N/A 3.380±0.00 N/A N/A
ENST00000493976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619023 N/A N/A N/A N/A N/A N/A 0.750±0.00 N/A N/A 3.553±0.00 N/A N/A N/A N/A
ENSG00000127989 ENST00000351870 0.483±0.00 1.588±0.00 N/A 1.011±0.18 0.848±0.00 0.877±0.44 0.714±0.63 2.098±0.59 0.985±0.32 0.557±0.32 0.504±0.00 1.561±1.05 0.865±0.46 1.956±1.33
ENST00000406735 N/A N/A 1.278±0.00 N/A 0.425±0.00 1.625±0.00 N/A N/A N/A N/A N/A 1.370±0.00 N/A 1.931±0.00
ENST00000419292 N/A N/A 0.360±0.00 0.513±0.00 0.450±0.00 0.227±0.05 0.134±0.00 N/A 0.289±0.12 0.371±0.00 0.038±0.00 0.554±0.33 0.085±0.00 N/A
ENST00000425936 N/A N/A N/A N/A N/A N/A N/A 1.684±0.00 N/A N/A N/A N/A N/A N/A
ENST00000442961 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.179±0.00 0.640±0.00 N/A N/A N/A
ENST00000454222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481516 N/A N/A N/A N/A N/A N/A N/A 2.862±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040407 ENSMUST00000044492 0.585±0.18 1.090±0.17 4.406±0.23 14.853±1.93 1.126±0.16 1.551±0.40 0.800±0.28 0.845±0.07 1.311±0.93 1.192±0.39 1.716±1.06 5.018±5.85 4.625±3.44 3.604±4.46
ENSMUST00000123119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132058 N/A N/A N/A N/A 0.651±0.00 N/A N/A N/A N/A N/A N/A 1.080±0.14 N/A N/A
ENSMUST00000133952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141817 N/A 15.188±5.64 N/A N/A 4.517±0.64 7.988±0.00 N/A N/A N/A N/A N/A 14.794±3.93 N/A N/A
ENSMUST00000143365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000040429 ENSMUST00000044746 0.305±0.00 N/A 1.122±0.61 0.503±0.03 0.262±0.03 N/A 0.096±0.01 0.169±0.00 1.436±0.81 N/A 0.156±0.06 0.837±0.45 1.004±0.49 0.655±0.00
ENSMUST00000117463 0.780±0.16 0.869±0.32 0.419±0.00 0.954±0.20 1.061±0.62 1.559±0.18 0.275±0.08 0.613±0.18 0.482±0.10 1.571±0.27 0.135±0.03 1.351±0.58 0.275±0.14 0.963±0.17

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