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Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: spinster homolog 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040447 Spns2 10090 - 11:72451638-72489904 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000045303 Spns2-001 72451638-72489904 protein_coding
  ENSMUST00000126452 Spns2-003 72452841-72454118 processed_transcript
  ENSMUST00000129274 Spns2-002 72451642-72454541 retained_intron
  ENSMUST00000144940 Spns2-005 72452732-72456621 protein_coding
  ENSMUST00000147418 Spns2-006 72459029-72475027 processed_transcript
  ENSMUST00000150491 Spns2-004 72452608-72456350 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045303ENSMUST00000150491
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045303 14.806±1.96 3.642±0.23 9.191±1.04 16.676±1.01 23.571±5.43 9.191±0.57 5.133±0.32 39.021±1.56 8.356±3.81 43.301±7.44 20.002±7.51 22.384±2.55 17.007±4.44 4.870±1.41
ENSMUST00000150491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 30.263±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003CS CIL_0003CS_0002 CGP 11:72451638-72550506

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001782 IMP B cell homeostasis
GO:0002260 IMP lymphocyte homeostasis
GO:0002920 IMP regulation of humoral immune response
GO:0003376 IMP sphingosine-1-phosphate signaling pathway
GO:0005575 ND cellular_component
GO:0006665 IMP sphingolipid metabolic process
GO:0006869 IEA lipid transport
GO:0016021 IEA integral component of membrane
GO:0043029 IMP T cell homeostasis
GO:0046624 IDA sphingolipid transporter activity
GO:0048073 IMP regulation of eye pigmentation
GO:0048535 IMP lymph node development
GO:0055085 IEA transmembrane transport
GO:0060348 IMP bone development
GO:0072676 IMP lymphocyte migration

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061017 spns2 spinster homolog 2 (Drosophila) protein_coding Danio_rerio
ENSG00000183018 SPNS2 spinster homolog 2 (Drosophila) protein_coding Homo_sapiens

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