C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: decapping exoribonuclease
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040482 Dxo 10090 + 17:34837019-34839233 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046244 Dxo-001 34837019-34839233 protein_coding
  ENSMUST00000172612 Dxo-007 34838324-34839137 protein_coding
  ENSMUST00000173063 Dxo-009 34837657-34839138 nonsense_mediated_decay
  ENSMUST00000173644 Dxo-003 34837082-34838359 retained_intron
  ENSMUST00000173768 Dxo-006 34838444-34839123 protein_coding
  ENSMUST00000173874 Dxo-002 34837019-34838648 protein_coding
  ENSMUST00000173995 Dxo-004 34837248-34837977 protein_coding
  ENSMUST00000174092 Dxo-010 34837399-34839137 protein_coding
  ENSMUST00000174569 Dxo-008 34838295-34839137 nonsense_mediated_decay
  ENSMUST00000174684 Dxo-005 34837993-34838683 nonsense_mediated_decay
  ENSMUST00000180043 Dxo-201 34837019-34839186 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MusclePlacentaENSMUST00000046244ENSMUST00000180043
Transcript ID Muscle Placenta
ENSMUST00000046244 N/A 24.913±0.00
ENSMUST00000180043 4.003±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000287 IDA magnesium ion binding
GO:0003729 IDA mRNA binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006402 IMP mRNA catabolic process
GO:0008152 IDA metabolic process
GO:0008409 IDA 5'-3' exonuclease activity
GO:0034353 IDA RNA pyrophosphohydrolase activity
GO:0050779 IMP RNA destabilization
GO:0071028 IMP nuclear mRNA surveillance
GO:0090305 IDA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036852 DXO decapping exoribonuclease protein_coding Danio_rerio
ENSG00000204348 DXO decapping exoribonuclease protein_coding Homo_sapiens

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