C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: decapping exoribonuclease
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000204348 DXO 9606 - 6:31969810-31972292 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000337523 DXO-001 31969810-31972292 protein_coding
  ENST00000375349 DXO-006 31969813-31972290 protein_coding
  ENST00000375356 DXO-007 31969844-31971984 protein_coding
  ENST00000460058 DXO-010 31970898-31972009 retained_intron
  ENST00000473976 DXO-005 31969815-31972095 retained_intron
  ENST00000474587 DXO-011 31969948-31972098 processed_transcript
  ENST00000477826 DXO-002 31969810-31972252 retained_intron
  ENST00000478221 DXO-003 31969817-31972238 processed_transcript
  ENST00000480240 DXO-009 31969907-31972136 nonsense_mediated_decay
  ENST00000485557 DXO-004 31969810-31972209 retained_intron
  ENST00000487914 DXO-012 31970643-31971989 processed_transcript
  ENST00000491327 DXO-013 31969810-31971685 retained_intron
  ENST00000492946 DXO-015 31970442-31972162 retained_intron
  ENST00000495340 DXO-014 31969815-31970923 protein_coding
  ENST00000498357 DXO-008 31969887-31971683 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000337523ENST00000375356ENST00000473976ENST00000474587ENST00000478221ENST00000491327ENST00000495340ENST00000498357
Transcript ID Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000337523 N/A 1.135±0.00 N/A N/A 3.152±0.00 N/A N/A 1.519±0.00 N/A 4.600±0.00 16.101±5.28
ENST00000375356 N/A N/A N/A N/A 0.558±0.00 N/A N/A N/A N/A N/A 6.968±0.00
ENST00000473976 N/A 0.910±0.00 N/A N/A N/A N/A 0.612±0.00 N/A N/A N/A N/A
ENST00000474587 N/A N/A N/A 1.087±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000478221 N/A N/A N/A N/A N/A 1.369±0.00 N/A N/A N/A N/A N/A
ENST00000491327 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.455±0.00 N/A
ENST00000495340 N/A N/A N/A N/A N/A N/A N/A 2.036±0.00 N/A N/A N/A
ENST00000498357 10.836±0.00 0.827±0.00 5.261±0.00 0.844±0.00 0.220±0.00 0.999±0.00 4.701±0.00 0.795±0.00 17.165±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000287 ISS magnesium ion binding
GO:0003729 ISS mRNA binding
GO:0005634 IEA nucleus
GO:0006402 ISS mRNA catabolic process
GO:0008152 ISS metabolic process
GO:0008409 ISS 5'-3' exonuclease activity
GO:0034353 ISS RNA pyrophosphohydrolase activity
GO:0050779 ISS RNA destabilization
GO:0071028 ISS nuclear mRNA surveillance
GO:0090305 ISS nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036852 DXO decapping exoribonuclease protein_coding Danio_rerio
ENSMUSG00000040482 Dxo decapping exoribonuclease protein_coding Mus_musculus

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