C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: OTU domain containing 6B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040550 Otud6b 10090 - 4:14809498-14826587 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000117268 Otud6b-001 14809498-14826587 protein_coding
  ENSMUST00000151012 Otud6b-002 14810046-14826395 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117268ENSMUST00000151012
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117268 1.462±0.33 1.492±0.55 8.344±2.21 6.600±2.29 1.317±0.29 0.857±0.23 2.289±0.17 1.822±0.38 3.672±2.30 1.338±0.34 12.879±0.77 3.737±3.10 6.279±2.87 7.793±2.83
ENSMUST00000151012 10.730±1.26 8.222±1.28 3.971±1.64 1.775±0.26 9.432±3.10 5.775±1.13 12.854±0.88 10.974±1.06 6.003±1.61 8.616±0.98 4.969±0.57 6.824±2.19 4.496±2.56 1.707±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00015F CIL_00015F_0002 CGP 4:14623620-14826587

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006508 IEA proteolysis
GO:0008150 ND biological_process
GO:0008234 IEA cysteine-type peptidase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022675 otud6b OTU domain containing 6B protein_coding Danio_rerio
ENSG00000155100 OTUD6B OTU domain containing 6B protein_coding Homo_sapiens

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