C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: OTU domain containing 6B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117268 Otud6b-001 ENSMUSG00000040550 10090 - 4:14809498-14826587 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117268
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117268 1.462±0.33 1.492±0.55 8.344±2.21 6.600±2.29 1.317±0.29 0.857±0.23 2.289±0.17 1.822±0.38 3.672±2.30 1.338±0.34 12.879±0.77 3.737±3.10 6.279±2.87 7.793±2.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00015F CIL_00015F_0002 CGP 4:14623620-14826587

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006508 IEA proteolysis
GO:0008150 ND biological_process
GO:0008234 IEA cysteine-type peptidase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000285420 OTUD6B-001 protein_coding Homo_sapiens 0 1098
ENST00000404789 OTUD6B-004 protein_coding Homo_sapiens 0 1033
ENST00000522894 OTUD6B-002 nonsense_mediated_decay Homo_sapiens 0 398
ENST00000524027 OTUD6B-003 retained_intron Homo_sapiens 0 388
ENST00000615618 OTUD6B-201 protein_coding Homo_sapiens 0 453
ENST00000617869 OTUD6B-202 protein_coding Homo_sapiens 0 1098

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