C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: l(3)mbt-like 4 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041565 L3mbtl4 10090 + 17:68273797-68777961 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000093007 L3mbtl4-201 68273797-68777961 protein_coding
  ENSMUST00000124543 L3mbtl4-003 68273797-68641569 protein_coding
  ENSMUST00000139383 L3mbtl4-002 68273797-68630903 nonsense_mediated_decay
  ENSMUST00000150573 L3mbtl4-001 68273797-68457858 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverOvaryPlacentaTestisENSMUST00000093007ENSMUST00000124543ENSMUST00000139383ENSMUST00000150573
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000093007 0.064±0.00 N/A N/A 0.117±0.00 0.113±0.04 N/A 0.121±0.06 N/A 0.092±0.05 0.021±0.01 1.481±0.00
ENSMUST00000124543 0.167±0.00 N/A 0.040±0.02 N/A 0.327±0.06 N/A 0.105±0.05 0.005±0.00 0.156±0.00 0.050±0.03 1.303±0.59
ENSMUST00000139383 0.106±0.04 N/A N/A N/A N/A N/A N/A 0.005±0.00 0.055±0.00 N/A N/A
ENSMUST00000150573 N/A 0.074±0.00 N/A N/A N/A 0.024±0.00 N/A 0.004±0.00 0.068±0.00 0.026±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KZ CIL_0006KZ_0002 CGP 17:67842713-68777961

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000094780 L3MBTL4 l(3)mbt-like 4 (Drosophila) protein_coding Danio_rerio
ENSG00000154655 L3MBTL4 l(3)mbt-like 4 (Drosophila) protein_coding Homo_sapiens

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