C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: matrix metallopeptidase 1b (interstitial collagenase)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041620 Mmp1b 10090 - 9:7368239-7388047 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047888 Mmp1b-001 7368239-7388047 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000047888
Transcript ID Placenta
ENSMUST00000047888 0.957±0.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MJ CIL_0002MJ_0002 CGP 9:7368239-7455972

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004222 IEA metalloendopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005581 IEA collagen trimer
GO:0006508 IEA proteolysis
GO:0008233 IDA peptidase activity
GO:0008270 IEA zinc ion binding
GO:0031012 IEA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000196611 MMP1 matrix metallopeptidase 1 (interstitial collagenase) protein_coding Homo_sapiens

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