C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002MJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196611-ENSG00000149968 CGP 9606 11:102789920-102843803
GeneTranscriptPositionBiotype
ENSG00000149968 (MMP3)
matrix metallopeptidase 3 (stromelysin 1, progelatinase) 		ENST00000299855 (MMP3-001) 102835801-102843803 protein_coding
ENST00000434103 (MMP3-002) 102836497-102838710 protein_coding
ENST00000524478 (MMP3-003) 102842252-102843607 nonsense_mediated_decay
ENSG00000196611 (MMP1)
matrix metallopeptidase 1 (interstitial collagenase) 		ENST00000315274 (MMP1-001) 102789920-102798160 protein_coding
ENSG00000256035 (AP000619.6)
 ENST00000546014 (AP000619.6-001) 102806948-102807916 processed_pseudogene
CIL_0002MJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041620-ENSMUSG00000043613 CGP 10090 9:7368239-7455972
GeneTranscriptPositionBiotype
ENSMUSG00000041620 (Mmp1b)
matrix metallopeptidase 1b (interstitial collagenase) 		ENSMUST00000047888 (Mmp1b-001) 7368239-7388047 protein_coding
ENSMUSG00000043613 (Mmp3)
matrix metallopeptidase 3 		ENSMUST00000034497 (Mmp3-201) 7445822-7455972 protein_coding
ENSMUSG00000049723 (Mmp12)
matrix metallopeptidase 12 		ENSMUST00000005950 (Mmp12-001) 7347374-7360461 protein_coding
ENSMUST00000065079 (Mmp12-004) 7347374-7369499 protein_coding
ENSMUST00000120655 (Mmp12-003) 7344397-7358464 protein_coding
ENSMUST00000127722 (Mmp12-002) 7347406-7358888 nonsense_mediated_decay
ENSMUST00000138220 (Mmp12-007) 7347406-7348333 processed_transcript
ENSMUST00000148005 (Mmp12-005) 7347406-7357663 retained_intron
ENSMUST00000150167 (Mmp12-006) 7344381-7349787 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002MJ_0001ENSG00000149968ENST00000299855ENST00000434103ENST00000524478ENSG00000196611ENST00000315274ENSG00000256035ENST00000546014CIL_0002MJ_0002ENSMUSG00000041620ENSMUST00000047888ENSMUSG00000043613ENSMUST00000034497ENSMUSG00000049723ENSMUST00000005950ENSMUST00000065079ENSMUST00000120655ENSMUST00000127722ENSMUST00000138220ENSMUST00000148005ENSMUST00000150167
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002MJ_0001ENSG00000149968ENST00000299855ENST00000434103ENSG00000196611ENST00000315274ENSG00000256035ENST00000546014CIL_0002MJ_0002ENSMUSG00000041620ENSMUST00000047888ENSMUSG00000043613ENSMUST00000034497ENSMUSG00000049723ENSMUST00000005950ENSMUST00000065079ENSMUST00000120655ENSMUST00000127722ENSMUST00000148005ENSMUST00000150167
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000149968 ENST00000299855 3.746±0.00 N/A N/A 0.016±0.00 0.235±0.00 N/A N/A N/A 0.630±0.00 0.682±0.00 0.111±0.00 2.461±2.34 N/A 2.095±0.00
ENST00000434103 N/A N/A N/A 0.128±0.00 2.158±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000196611 ENST00000315274 0.817±0.00 0.540±0.00 N/A 0.013±0.00 0.441±0.00 0.601±0.27 0.023±0.00 1.195±0.00 0.064±0.00 2.733±1.60 N/A 2.379±1.12 6.048±0.87 N/A
ENSG00000256035 ENST00000546014 0.026±0.00 0.026±0.00 N/A N/A N/A N/A 0.025±0.00 N/A N/A 0.012±0.00 N/A 0.070±0.06 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041620 ENSMUST00000047888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.957±0.55 N/A
ENSMUSG00000043613 ENSMUST00000034497 4.162±2.73 0.145±0.09 0.544±0.07 0.021±0.00 33.280±10.31 0.602±0.18 1.447±0.30 0.398±0.13 0.062±0.04 5.347±0.46 0.245±0.17 1.008±0.39 0.611±1.02 N/A
ENSMUSG00000049723 ENSMUST00000005950 N/A N/A N/A N/A 0.135±0.00 0.083±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000065079 N/A N/A 0.499±0.00 N/A N/A 0.215±0.10 N/A N/A N/A N/A 0.047±0.01 1.002±0.75 4.551±0.00 N/A
ENSMUST00000120655 1.655±1.36 0.951±0.51 0.654±0.39 N/A 0.498±0.15 0.297±0.14 0.099±0.05 0.424±0.23 0.064±0.02 0.801±0.07 N/A 1.232±1.62 3.740±3.82 N/A
ENSMUST00000127722 0.285±0.00 0.453±0.14 0.220±0.15 0.008±0.00 0.274±0.00 N/A N/A 0.152±0.03 0.031±0.01 0.526±0.00 0.015±0.00 2.004±0.95 2.402±0.00 N/A
ENSMUST00000138220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148005 0.154±0.08 0.229±0.08 N/A N/A 0.108±0.05 0.141±0.06 N/A 0.105±0.02 0.083±0.04 0.097±0.00 0.010±0.01 0.266±0.18 N/A N/A
ENSMUST00000150167 N/A N/A N/A N/A N/A 0.328±0.05 N/A N/A N/A N/A N/A 1.937±0.15 N/A N/A

Loading