C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP-binding cassette, sub-family A (ABC1), member 8a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041828 Abca8a 10090 - 11:110025634-110095978 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046223 Abca8a-201 110025636-110095937 protein_coding
  ENSMUST00000100287 Abca8a-001 110025634-110095978 protein_coding
  ENSMUST00000106662 Abca8a-002 110084164-110095937 protein_coding
  ENSMUST00000106664 Abca8a-202 110025636-110095937 protein_coding
  ENSMUST00000129810 Abca8a-004 110068795-110070379 processed_transcript
  ENSMUST00000141279 Abca8a-006 110026848-110030081 processed_transcript
  ENSMUST00000146635 Abca8a-003 110070313-110075657 protein_coding
  ENSMUST00000154849 Abca8a-005 110062870-110065373 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046223ENSMUST00000100287ENSMUST00000106664ENSMUST00000141279
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046223 2.063±0.23 1.133±0.24 4.457±0.32 0.086±0.04 4.078±0.91 0.448±0.01 4.460±1.00 0.891±0.24 5.453±5.55 3.478±1.77 2.072±0.72 3.347±3.35 0.103±0.09 0.133±0.00
ENSMUST00000100287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.587±0.00 0.003±0.00 N/A
ENSMUST00000106664 N/A N/A N/A N/A N/A 0.367±0.00 N/A N/A N/A N/A N/A 0.789±0.00 0.003±0.00 N/A
ENSMUST00000141279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.102±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0005886 IEA plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0006810 IEA transport
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0016887 IEA ATPase activity

Homologs

No Homologs available.

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