C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | synaptotagmin-like 3 | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSMUSG00000041831  |
Sytl3 | 10090 | + |
17:6673458-6738042  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENSMUST00000097430 |
Sytl3-002 | 6673610-6737836 | protein_coding | ||
| ENSMUST00000115763 |
Sytl3-005 | 6673583-6715600 | nonsense_mediated_decay | ||
| ENSMUST00000159394 |
Sytl3-001 | 6673610-6737836 | nonsense_mediated_decay | ||
| ENSMUST00000159880 |
Sytl3-008 | 6705830-6737836 | protein_coding | ||
| ENSMUST00000160483 |
Sytl3-006 | 6689072-6738042 | protein_coding | ||
| ENSMUST00000160771 |
Sytl3-009 | 6708482-6734274 | retained_intron | ||
| ENSMUST00000161118 |
Sytl3-007 | 6705830-6737836 | nonsense_mediated_decay | ||
| ENSMUST00000162013 |
Sytl3-004 | 6673458-6680507 | processed_transcript | ||
| ENSMUST00000162635 |
Sytl3-003 | 6673610-6737836 | nonsense_mediated_decay | ||
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004W4 | CIL_0004W4_0002 | CGP | 17:6648941-6738042 |
| CIL_0004W5 | CIL_0004W5_0002 | CGP | 17:6673458-6782784 |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005543 | IDA | phospholipid binding |
| GO:0005544 | IEA:IDA | calcium-dependent phospholipid binding |
| GO:0006886 | IEA | intracellular protein transport |
| GO:0006887 | IDA | exocytosis |
| GO:0008270 | NAS | zinc ion binding |
| GO:0016020 | IDA | membrane |
| GO:0017137 | IEA | Rab GTPase binding |
| GO:0019897 | IDA | extrinsic component of plasma membrane |
| GO:0042043 | IDA | neurexin family protein binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSDARG00000043468
|
sytl3 | synaptotagmin-like 3 | protein_coding | Danio_rerio | |
|
ENSG00000164674
|
SYTL3 | synaptotagmin-like 3 | protein_coding | Homo_sapiens | |
