C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synaptotagmin-like 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164674 SYTL3 9606 + 6:158650014-158764876 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000297239 SYTL3-001 158661319-158764869 protein_coding
  ENST00000360448 SYTL3-201 158650014-158764876 protein_coding
  ENST00000367081 SYTL3-202 158650014-158764876 protein_coding
  ENST00000469735 SYTL3-002 158650053-158663048 processed_transcript
  ENST00000611299 SYTL3-203 158650014-158764876 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000297239ENST00000360448ENST00000367081ENST00000611299
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000297239 0.403±0.00 N/A N/A 0.459±0.17 2.706±0.00 0.853±0.00 0.779±0.66 0.588±0.25 0.731±0.00 5.775±0.00 1.381±0.22 0.881±0.36 0.664±0.21 1.091±0.04
ENST00000360448 N/A 0.680±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.442±0.06 0.297±0.00 2.227±0.00
ENST00000367081 0.629±0.00 N/A 0.583±0.00 N/A 0.419±0.00 N/A N/A 0.188±0.00 N/A 2.979±0.00 0.311±0.00 1.142±0.79 0.457±0.00 N/A
ENST00000611299 N/A 0.944±0.00 N/A N/A 1.485±0.00 N/A 0.662±0.00 N/A 0.835±0.00 1.924±0.00 N/A 0.469±0.15 N/A 0.365±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004W4 CIL_0004W4_0001 CGP 6:158636474-158764876
CIL_0004W5 CIL_0004W5_0001 CGP 6:158650014-158819412

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005543 IEA phospholipid binding
GO:0005544 IEA calcium-dependent phospholipid binding
GO:0006886 IEA intracellular protein transport
GO:0006887 IEA exocytosis
GO:0016020 IEA membrane
GO:0017137 IEA Rab GTPase binding
GO:0019897 IEA extrinsic component of plasma membrane
GO:0042043 IEA neurexin family protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043468 sytl3 synaptotagmin-like 3 protein_coding Danio_rerio
ENSMUSG00000041831 Sytl3 synaptotagmin-like 3 protein_coding Mus_musculus

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