C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: oxysterol binding protein-like 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042359 Osbpl6 10090 + 2:76406508-76600647 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000077972 Osbpl6-201 76406538-76600643 protein_coding
  ENSMUST00000111929 Osbpl6-001 76406538-76600647 protein_coding
  ENSMUST00000111930 Osbpl6-002 76406558-76596596 protein_coding
  ENSMUST00000124601 Osbpl6-007 76568120-76580028 processed_transcript
  ENSMUST00000128034 Osbpl6-004 76499097-76541530 processed_transcript
  ENSMUST00000133275 Osbpl6-003 76406508-76407931 processed_transcript
  ENSMUST00000134213 Osbpl6-006 76406561-76407467 processed_transcript
  ENSMUST00000184442 Osbpl6-005 76548340-76596045 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000077972ENSMUST00000111929ENSMUST00000111930ENSMUST00000134213ENSMUST00000184442
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000077972 0.264±0.00 0.785±0.18 N/A 3.824±0.80 0.394±0.19 0.780±0.01 0.337±0.08 3.734±0.81 0.018±0.01 3.224±0.44 3.402±2.05 0.750±0.23 1.506±1.06 0.058±0.03
ENSMUST00000111929 N/A N/A 0.168±0.00 1.475±0.43 0.236±0.00 0.892±0.33 N/A 2.474±0.37 0.047±0.00 N/A N/A 0.775±0.11 0.735±0.45 0.015±0.00
ENSMUST00000111930 0.364±0.08 1.665±0.62 0.435±0.00 N/A 0.508±0.10 1.610±0.50 1.154±0.18 4.136±0.39 0.067±0.02 6.166±1.40 2.920±0.38 2.007±0.80 0.758±0.60 0.058±0.04
ENSMUST00000134213 N/A 4.679±1.32 N/A N/A 2.449±1.04 7.011±2.25 N/A N/A 0.086±0.03 27.857±3.15 N/A 6.965±1.84 N/A 0.543±0.05
ENSMUST00000184442 0.277±0.13 1.223±0.43 N/A N/A N/A 1.082±0.21 N/A 6.272±1.53 0.038±0.01 N/A N/A 1.065±0.22 0.960±1.01 0.068±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Z2 CIL_0000Z2_0002 CGP 2:76369984-76600647
CIL_0000Z1 CIL_0000Z1_0002 CGP 2:76406508-76648015

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005829 IEA cytosol
GO:0005886 IEA plasma membrane
GO:0006869 IEA lipid transport
GO:0008150 ND biological_process
GO:0008289 IEA lipid binding
GO:0031965 IEA nuclear membrane
GO:0097038 IEA perinuclear endoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063730 osbpl6 oxysterol binding protein-like 6 protein_coding Danio_rerio
ENSG00000079156 OSBPL6 oxysterol binding protein-like 6 protein_coding Homo_sapiens

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