C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000Z1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000079156-ENSG00000180228 CGP 9606 2:178194481-178451512
GeneTranscriptPositionBiotype
ENSG00000079156 (OSBPL6)
oxysterol binding protein-like 6 		ENST00000190611 (OSBPL6-001) 178194649-178399433 protein_coding
ENST00000315022 (OSBPL6-006) 178320244-178395621 protein_coding
ENST00000357080 (OSBPL6-003) 178194500-178382779 protein_coding
ENST00000359685 (OSBPL6-201) 178194481-178399432 protein_coding
ENST00000392505 (OSBPL6-002) 178194481-178395772 protein_coding
ENST00000409045 (OSBPL6-004) 178194523-178395772 protein_coding
ENST00000409631 (OSBPL6-005) 178284927-178395785 protein_coding
ENST00000477097 (OSBPL6-008) 178323570-178332701 processed_transcript
ENST00000477646 (OSBPL6-007) 178194489-178285038 processed_transcript
ENSG00000180228 (PRKRA)
protein kinase, interferon-inducible double stranded RNA dependent activator 		ENST00000325748 (PRKRA-001) 178431414-178451231 protein_coding
ENST00000424699 (PRKRA-002) 178431654-178451151 nonsense_mediated_decay
ENST00000432031 (PRKRA-009) 178431976-178450757 protein_coding
ENST00000448279 (PRKRA-011) 178443289-178450484 nonsense_mediated_decay
ENST00000457633 (PRKRA-008) 178443343-178451059 protein_coding
ENST00000460433 (PRKRA-010) 178445495-178450729 processed_transcript
ENST00000463882 (PRKRA-006) 178450079-178451173 retained_intron
ENST00000466165 (PRKRA-007) 178447320-178451113 retained_intron
ENST00000470200 (PRKRA-005) 178445426-178451512 processed_transcript
ENST00000474793 (PRKRA-012) 178436274-178445883 retained_intron
ENST00000487082 (PRKRA-003) 178431966-178450764 protein_coding
ENST00000490501 (PRKRA-004) 178431415-178444007 retained_intron
ENSG00000204311 (DFNB59)
deafness, autosomal recessive 59 		ENST00000375129 (DFNB59-003) 178453267-178461274 protein_coding
ENST00000409117 (DFNB59-001) 178451436-178461390 protein_coding
ENST00000437056 (DFNB59-002) 178453251-178461287 retained_intron
ENST00000442710 (DFNB59-005) 178453568-178461204 protein_coding
ENST00000444615 (DFNB59-004) 178454479-178460432 nonsense_mediated_decay
ENST00000605419 (DFNB59-006) 178456009-178458627 processed_transcript
ENSG00000260931 (RP11-65L3.1)
 ENST00000565104 (RP11-65L3.1-001) 178400834-178402891 lincRNA
CIL_0000Z1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042359-ENSMUSG00000002731 CGP 10090 2:76406508-76648015
GeneTranscriptPositionBiotype
ENSMUSG00000002731 (Prkra)
protein kinase, interferon inducible double stranded RNA dependent activator 		ENSMUST00000002808 (Prkra-001) 76629898-76648015 protein_coding
ENSMUST00000140493 (Prkra-002) 76636795-76640733 processed_transcript
ENSMUSG00000042359 (Osbpl6)
oxysterol binding protein-like 6 		ENSMUST00000077972 (Osbpl6-201) 76406538-76600643 protein_coding
ENSMUST00000111929 (Osbpl6-001) 76406538-76600647 protein_coding
ENSMUST00000111930 (Osbpl6-002) 76406558-76596596 protein_coding
ENSMUST00000124601 (Osbpl6-007) 76568120-76580028 processed_transcript
ENSMUST00000128034 (Osbpl6-004) 76499097-76541530 processed_transcript
ENSMUST00000133275 (Osbpl6-003) 76406508-76407931 processed_transcript
ENSMUST00000134213 (Osbpl6-006) 76406561-76407467 processed_transcript
ENSMUST00000184442 (Osbpl6-005) 76548340-76596045 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000Z1_0001ENSG00000079156ENST00000190611ENST00000315022ENST00000357080ENST00000359685ENST00000392505ENST00000409045ENST00000409631ENST00000477097ENST00000477646ENSG00000180228ENST00000325748ENST00000424699ENST00000432031ENST00000448279ENST00000457633ENST00000460433ENST00000463882ENST00000466165ENST00000470200ENST00000474793ENST00000487082ENST00000490501ENSG00000204311ENST00000375129ENST00000409117ENST00000437056ENST00000442710ENST00000444615ENST00000605419ENSG00000260931ENST00000565104CIL_0000Z1_0002ENSMUSG00000002731ENSMUST00000002808ENSMUST00000140493ENSMUSG00000042359ENSMUST00000077972ENSMUST00000111929ENSMUST00000111930ENSMUST00000124601ENSMUST00000128034ENSMUST00000133275ENSMUST00000134213ENSMUST00000184442
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000Z1_0001ENSG00000079156ENST00000190611ENST00000315022ENST00000357080ENST00000359685ENST00000392505ENST00000409045ENST00000409631ENSG00000180228ENST00000325748ENST00000424699ENST00000432031ENST00000463882ENST00000490501ENSG00000204311ENST00000375129ENST00000409117ENSG00000260931ENST00000565104CIL_0000Z1_0002ENSMUSG00000002731ENSMUST00000002808ENSMUST00000140493ENSMUSG00000042359ENSMUST00000077972ENSMUST00000111929ENSMUST00000111930ENSMUST00000134213ENSMUST00000184442
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000079156 ENST00000190611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.166±0.00 0.068±0.00 N/A
ENST00000315022 N/A N/A N/A 0.908±0.00 N/A N/A 0.213±0.00 N/A 0.454±0.00 0.821±0.00 N/A 0.051±0.00 0.152±0.02 0.326±0.00
ENST00000357080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.021±0.00 0.247±0.00 N/A N/A
ENST00000359685 0.077±0.00 N/A 0.354±0.00 1.774±1.06 N/A N/A N/A N/A N/A 0.440±0.00 N/A 0.050±0.01 N/A N/A
ENST00000392505 N/A N/A N/A 1.138±0.00 N/A N/A N/A N/A N/A 0.570±0.00 N/A N/A N/A 0.387±0.00
ENST00000409045 N/A N/A N/A N/A 0.522±0.00 0.638±0.00 0.304±0.00 0.659±0.00 0.316±0.02 1.434±0.00 2.334±0.00 0.292±0.15 0.189±0.04 0.459±0.26
ENST00000409631 0.238±0.00 0.592±0.00 N/A 0.891±0.00 0.363±0.00 N/A N/A 0.356±0.00 N/A N/A 7.093±0.00 0.028±0.00 N/A N/A
ENST00000477097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000180228 ENST00000325748 13.807±0.00 13.018±0.00 1.782±0.00 13.384±7.53 5.447±3.46 11.133±7.85 7.915±6.54 20.987±0.00 2.407±0.11 10.309±0.00 13.010±8.68 10.624±7.42 5.977±3.66 20.529±0.00
ENST00000424699 N/A N/A N/A N/A N/A N/A 5.919±0.00 N/A N/A 4.482±0.00 11.235±0.00 N/A 1.465±0.00 11.976±0.00
ENST00000432031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.446±0.00
ENST00000448279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463882 N/A N/A N/A N/A N/A N/A N/A 2.762±0.00 N/A N/A 7.441±0.00 N/A N/A N/A
ENST00000466165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490501 N/A N/A 1.265±0.00 2.754±0.00 N/A N/A N/A N/A 1.264±0.00 N/A N/A 1.128±0.00 N/A N/A
ENSG00000204311 ENST00000375129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.132±0.00
ENST00000409117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.373±0.00
ENST00000437056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000605419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260931 ENST00000565104 0.011±0.00 0.099±0.00 0.263±0.00 1.386±0.29 0.035±0.00 0.110±0.00 0.074±0.01 0.025±0.00 0.079±0.01 0.051±0.03 0.682±0.08 0.055±0.02 0.018±0.00 0.038±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002731 ENSMUST00000002808 14.827±0.82 27.433±5.54 16.499±1.90 23.843±14.64 8.979±3.28 18.345±6.06 5.199±0.63 9.605±1.26 7.940±1.99 8.517±2.51 1.666±0.28 19.606±6.57 5.511±2.81 7.038±4.19
ENSMUST00000140493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.899±0.00 N/A N/A
ENSMUSG00000042359 ENSMUST00000077972 0.264±0.00 0.785±0.18 N/A 3.824±0.80 0.394±0.19 0.780±0.01 0.337±0.08 3.734±0.81 0.018±0.01 3.224±0.44 3.402±2.05 0.750±0.23 1.506±1.06 0.058±0.03
ENSMUST00000111929 N/A N/A 0.168±0.00 1.475±0.43 0.236±0.00 0.892±0.33 N/A 2.474±0.37 0.047±0.00 N/A N/A 0.775±0.11 0.735±0.45 0.015±0.00
ENSMUST00000111930 0.364±0.08 1.665±0.62 0.435±0.00 N/A 0.508±0.10 1.610±0.50 1.154±0.18 4.136±0.39 0.067±0.02 6.166±1.40 2.920±0.38 2.007±0.80 0.758±0.60 0.058±0.04
ENSMUST00000124601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134213 N/A 4.679±1.32 N/A N/A 2.449±1.04 7.011±2.25 N/A N/A 0.086±0.03 27.857±3.15 N/A 6.965±1.84 N/A 0.543±0.05
ENSMUST00000184442 0.277±0.13 1.223±0.43 N/A N/A N/A 1.082±0.21 N/A 6.272±1.53 0.038±0.01 N/A N/A 1.065±0.22 0.960±1.01 0.068±0.02

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