C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cyclin D binding myb-like transcription factor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042508 Dmtf1 10090 - 5:9118801-9161776 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000071921 Dmtf1-001 9118801-9161776 protein_coding
  ENSMUST00000095017 Dmtf1-002 9118872-9161749 protein_coding
  ENSMUST00000183347 Dmtf1-019 9119793-9120731 retained_intron
  ENSMUST00000183448 Dmtf1-010 9119070-9161671 nonsense_mediated_decay
  ENSMUST00000183525 Dmtf1-014 9132559-9152045 protein_coding
  ENSMUST00000183792 Dmtf1-006 9139818-9161734 retained_intron
  ENSMUST00000183973 Dmtf1-009 9120007-9161701 protein_coding
  ENSMUST00000184120 Dmtf1-011 9118873-9161752 nonsense_mediated_decay
  ENSMUST00000184159 Dmtf1-008 9118868-9161719 nonsense_mediated_decay
  ENSMUST00000184370 Dmtf1-018 9121454-9126577 nonsense_mediated_decay
  ENSMUST00000184372 Dmtf1-017 9131288-9161716 protein_coding
  ENSMUST00000184401 Dmtf1-015 9118877-9153148 nonsense_mediated_decay
  ENSMUST00000184620 Dmtf1-013 9118877-9161743 nonsense_mediated_decay
  ENSMUST00000184888 Dmtf1-012 9118873-9161759 nonsense_mediated_decay
  ENSMUST00000184903 Dmtf1-004 9122058-9161743 processed_transcript
  ENSMUST00000184947 Dmtf1-005 9129367-9161737 retained_intron
  ENSMUST00000185100 Dmtf1-016 9150434-9152938 protein_coding
  ENSMUST00000185193 Dmtf1-003 9146368-9161749 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071921ENSMUST00000095017ENSMUST00000183448ENSMUST00000183973ENSMUST00000184159ENSMUST00000184372ENSMUST00000184903
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071921 2.997±0.19 4.325±0.95 4.542±0.18 7.244±0.74 4.134±1.28 3.474±0.30 1.291±0.25 2.557±0.58 3.672±0.77 6.053±0.00 1.198±0.29 5.083±1.71 3.369±0.43 6.163±1.48
ENSMUST00000095017 4.375±0.67 2.066±0.00 6.701±0.26 9.029±4.76 4.654±2.23 N/A 1.325±0.22 2.176±0.00 3.885±0.98 N/A 1.550±0.46 4.129±1.74 9.155±3.01 N/A
ENSMUST00000183448 N/A N/A N/A 5.965±0.00 N/A N/A 0.753±0.08 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183973 N/A 3.096±0.00 N/A 8.998±3.26 N/A N/A 1.505±0.21 N/A 5.745±0.00 N/A N/A 4.902±1.21 6.911±1.96 3.840±0.00
ENSMUST00000184159 N/A N/A N/A 6.268±0.00 N/A N/A N/A N/A N/A N/A N/A 4.746±0.00 6.210±3.00 4.086±0.00
ENSMUST00000184372 N/A N/A N/A 22.211±0.00 N/A N/A N/A N/A N/A N/A N/A 19.624±0.00 36.610±12.71 14.151±0.00
ENSMUST00000184903 N/A N/A N/A 7.615±0.00 N/A N/A N/A N/A N/A N/A N/A 7.052±0.00 N/A 4.786±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003D5 CIL_0003D5_0002 CGP 5:9100737-9161776
CIL_00034U CIL_00034U_0002 CGP 5:9118801-9481825

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007049 IEA cell cycle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000025824 dmtf1 cyclin D binding myb-like transcription factor 1 protein_coding Danio_rerio
ENSG00000135164 DMTF1 cyclin D binding myb-like transcription factor 1 protein_coding Homo_sapiens

Loading