C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin D binding myb-like transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184159 Dmtf1-008 ENSMUSG00000042508 10090 - 5:9118868-9161719 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000184159
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000184159 6.268±0.00 4.746±0.00 6.210±3.00 4.086±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003D5 CIL_0003D5_0002 CGP 5:9100737-9161776
CIL_00034U CIL_00034U_0002 CGP 5:9118801-9481825

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007049 IEA cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000029084 dmtf1-201 protein_coding Danio_rerio 0 392
ENSDART00000133214 dmtf1-001 protein_coding Danio_rerio 0 392
ENST00000257637 TMEM243-001 protein_coding Homo_sapiens 1.96182e-44 183
ENST00000331242 DMTF1-001 protein_coding Homo_sapiens 0 1415
ENST00000394703 DMTF1-002 protein_coding Homo_sapiens 0 1415
ENST00000412139 DMTF1-003 nonsense_mediated_decay Homo_sapiens 0 1299
ENST00000413276 DMTF1-025 protein_coding Homo_sapiens 0 1413
ENST00000414630 DMTF1-008 protein_coding Homo_sapiens 0 228
ENST00000420131 DMTF1-012 protein_coding Homo_sapiens 6.99949e-42 174
ENST00000423590 DMTF1-018 protein_coding Homo_sapiens 0 228
ENST00000425406 DMTF1-006 nonsense_mediated_decay Homo_sapiens 0 1299
ENST00000425705 DMTF1-004 protein_coding Homo_sapiens 0 488
ENST00000428819 DMTF1-009 protein_coding Homo_sapiens 3e-40 169
ENST00000430405 DMTF1-015 protein_coding Homo_sapiens 0 399
ENST00000432366 DMTF1-019 protein_coding Homo_sapiens 0 228
ENST00000432937 DMTF1-007 protein_coding Homo_sapiens 0 1415
ENST00000433078 TMEM243-002 protein_coding Homo_sapiens 9.94922e-44 182
ENST00000434534 DMTF1-016 protein_coding Homo_sapiens 0 228
ENST00000446796 DMTF1-011 protein_coding Homo_sapiens 0 228
ENST00000447863 DMTF1-005 nonsense_mediated_decay Homo_sapiens 0 1299
ENST00000448598 DMTF1-014 protein_coding Homo_sapiens 0 228
ENST00000449088 DMTF1-013 protein_coding Homo_sapiens 0 228
ENST00000453049 DMTF1-010 protein_coding Homo_sapiens 1.4013e-45 187
ENST00000454008 DMTF1-024 protein_coding Homo_sapiens 0 547
ENST00000473521 DMTF1-021 retained_intron Homo_sapiens 0 682
ENST00000480982 DMTF1-023 retained_intron Homo_sapiens 0 401
ENST00000488352 DMTF1-022 retained_intron Homo_sapiens 0 1040
ENST00000547146 DMTF1-026 nonsense_mediated_decay Homo_sapiens 0 1299
ENST00000578926 DMTF1-035 retained_intron Homo_sapiens 0 219
ENST00000579592 DMTF1-028 protein_coding Homo_sapiens 2e-32 143
ENST00000579677 DMTF1-029 nonsense_mediated_decay Homo_sapiens 0 1299
ENST00000579850 DMTF1-020 nonsense_mediated_decay Homo_sapiens 0 3077
ENST00000580010 DMTF1-017 retained_intron Homo_sapiens 0 285
ENST00000580803 DMTF1-037 retained_intron Homo_sapiens 0 486
ENST00000582204 DMTF1-038 protein_coding Homo_sapiens 0 678
ENST00000582887 DMTF1-036 retained_intron Homo_sapiens 0 719
ENST00000582925 DMTF1-033 protein_coding Homo_sapiens 0 219
ENST00000584619 DMTF1-031 nonsense_mediated_decay Homo_sapiens 0 719

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