C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: predicted gene 15800
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000042744 Gm15800 10090 + 5:121220219-121368577 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042614 Gm15800-201 121220219-121368573 protein_coding
  ENSMUST00000100769 Gm15800-003 121305730-121324823 protein_coding
  ENSMUST00000119892 Gm15800-001 121220219-121368577 protein_coding
  ENSMUST00000128514 Gm15800-002 121286833-121305034 retained_intron
  ENSMUST00000130655 Gm15800-008 121320023-121322779 processed_transcript
  ENSMUST00000148368 Gm15800-006 121291273-121299449 protein_coding
  ENSMUST00000155743 Gm15800-007 121315755-121318651 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042614ENSMUST00000119892
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042614 4.153±0.57 3.302±1.96 2.945±0.86 10.513±3.00 4.458±1.18 5.875±0.59 1.719±0.65 2.231±1.19 3.704±3.56 4.838±1.49 1.014±0.51 5.406±1.94 2.331±1.63 5.291±2.77
ENSMUST00000119892 1.064±0.13 1.950±0.47 1.334±0.00 2.998±0.83 1.921±0.24 3.102±1.46 1.861±1.13 1.818±1.15 2.453±2.98 1.636±0.47 0.571±0.41 2.345±0.72 1.010±0.36 7.157±4.15

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003682 HECTD4 (1 of 3) HECT domain containing E3 ubiquitin protein ligase 4 protein_coding Danio_rerio
ENSDARG00000079151 CU459012.3 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000090715 HECTD4 (3 of 3) HECT domain containing E3 ubiquitin protein ligase 4 protein_coding Danio_rerio
ENSG00000173064 HECTD4 HECT domain containing E3 ubiquitin protein ligase 4 protein_coding Homo_sapiens

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